From bbfb6506d2a11cccc9d81402ca5b193a0007a26b Mon Sep 17 00:00:00 2001
From: valosekj <jan.valosek@upol.cz>
Date: Tue, 30 Jan 2024 16:27:45 -0500
Subject: [PATCH] Add 'SpatialReference': 'orig' key-value pair based on
 https://github.com/spinalcordtoolbox/manual-correction/pull/76#issuecomment-1912384077

---
 manual_correction.py | 3 ++-
 1 file changed, 2 insertions(+), 1 deletion(-)

diff --git a/manual_correction.py b/manual_correction.py
index f5046a4..fa7a590 100644
--- a/manual_correction.py
+++ b/manual_correction.py
@@ -520,7 +520,8 @@ def update_json(fname_nifti, name_rater, modified):
     # If the json file does not exist, initialize a new one
     else:
         # Init new json dict
-        json_dict = {'GeneratedBy': []}
+        json_dict = {'SpatialReference': 'orig',
+                     'GeneratedBy': []}
 
     # If the label was modified, add "Note": "Manually corrected" to the JSON sidecar
     if modified: