-
Notifications
You must be signed in to change notification settings - Fork 61
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
pair-map using bowtie2 by --mapper failed #348
Comments
Hello, Can you post the error message that you are having? Regards David |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Hi!
I failed to do bowtie2 pair-map with --mapper bowtie2 setting. This is my command, has some problems. Could you give me some suggestion about how to do pair mapping? Many thanks!
tadbit map --mapper bowtie2 --renz MboI -w sample1
--index /home/database/yeast
--fastq SRR4433970_1.fastq --read 1
--fastq2 SRR4433970_2.fastq --read 2
The text was updated successfully, but these errors were encountered: