.xml.state not found

[kesiaeds]

Dear all I am trying to run BEAST2 2.6 version and I keep getting this err message. The full log file and xml file is attached. I would really apppreciate if you could help me figure out what is the problem.
slurm-4281671.txt
cluster9.old.fixed.w.xml.zip
cluster9.old.w.xml.zip

Restoring from file
File error: /oak/stanford/scg/lab_jandr/Kesia/TB/tb_genomics/study/cluster/BEAST/cluster9.old.fixed.w.xml.state (No such file or directory)
java.lang.RuntimeException: An error was encounted. Terminating BEAST
at beast.app.util.ErrorLogHandler.publish(Unknown Source)
at java.util.logging.Logger.log(Logger.java:738)
at java.util.logging.Logger.doLog(Logger.java:765)
at java.util.logging.Logger.log(Logger.java:788)
at java.util.logging.Logger.severe(Logger.java:1464)
at beast.app.beastapp.BeastMain.(Unknown Source)
at beast.app.beastapp.BeastMain.main(Unknown Source)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at beast.app.beastapp.BeastLauncher.run(Unknown Source)
at beast.app.beastapp.BeastLauncher.main(Unknown Source)

[zyy-1111]

have you fixed it?I met the same problem

[rbouckaert]

This can happen when the state file moved. First thing to do is check whether the file that is missing is somewhere else. If so, start beast with the --statefile option, like so:

beast -statefile /path/to/where/the/state/file/is/beast.xml.state -resume beast.xml

where /path/to/where/the/state/file/is/ the path to where the state file is.

[zyy-1111]

I tried chaning it, but still can't work. At 2024-06-20 04:31:03, "Remco Bouckaert" ***@***.***> wrote: This can happen when the state file moved. First thing to do is check whether the file that is missing is somewhere else. If so, start beast with the --statefile option, like so: beast -statefile /path/to/where/the/state/file/is/beast.xml.state -resume beast.xml where /path/to/where/the/state/file/is/ the path to where the state file is. — Reply to this email directly, view it on GitHub, or unsubscribe. You are receiving this because you commented.Message ID: ***@***.***>

[zyy-1111]

Could u share a xml file that can run successfully?

[rbouckaert]

Any of the example files that come with BEAST should run.