Skip to content
This repository has been archived by the owner on May 23, 2024. It is now read-only.

Generate test data with qualifiers #640

Draft
wants to merge 80 commits into
base: master
Choose a base branch
from

Conversation

gaurav
Copy link
Member

@gaurav gaurav commented Apr 1, 2023

PR #620 covers adapting the generation of test data from the existing (and out of date) predicates/MKG data. This PR attempts to replace that with a new process that gets the Biolink class hierarchy and relations directly from the database, allows us to regenerate (and hopefully fix MKG issues like #585) in one fell swoop.

WIP

We should now have everything we need to make this work. Unfortunately,
of course, it doesn't. So now we need to figure out why.
gaurav added a commit to ExposuresProvider/cam-pipeline that referenced this pull request Aug 1, 2023
gaurav added a commit to ExposuresProvider/cam-pipeline that referenced this pull request Nov 5, 2023
These examples are reformatted from ee2eecc06eaad784fb29b9ff3aae9a8f87cf1ced
in ExposuresProvider/cam-kp-api#640, which
should be the most recent version of that test code.

These tests fail, but I wanted to record exactly what they said. I'll
update them in later commits.
Sign up for free to subscribe to this conversation on GitHub. Already have an account? Sign in.
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

1 participant