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Q: When running DOSDP query, can entity_label columns be populated? #147

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matentzn opened this issue Jul 12, 2019 · 0 comments
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@matentzn
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Currently, when running:

dosdp-tools query --ontology=dpo-edit.owl --reasoner=elk --template=../patterns/dosdp-patterns/dpoAbnormalEntity.yaml --obo-prefixes=true --outfile=../patterns/data/original/dpoAbnormalEntity.tsv

I get a tsv like this:

defined_class	defined_class_label	entity	entity_label	quality	quality_label
http://purl.obolibrary.org/obo/FBcv_0000423	DNA repair defective	http://purl.obolibrary.org/obo/GO_0006281		http://purl.obolibrary.org/obo/PATO_0000001	

So there are columns for entity_label and quality_label, but no values in them. Is there a way to get this column populated?

Thanks a lot :)

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