Fix download of MTBLS data files

ISA-tools · Nov 6, 2023 · a44f171 · a44f171
1 parent 4d3c9b3
commit a44f171
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/tests/utils.py b/tests/utils.py
@@ -60,7 +60,7 @@ def download_mtbls_study(study_id, dl_directory=None):
  with contextlib.closing(ftplib.FTP("ftp.ebi.ac.uk")) as ebi_ftp:
  ebi_ftp.login()
  ebi_ftp.cwd(STUDY_DIR)
- files_list = [os.path.join(STUDY_DIR, study_file) for study_file in ebi_ftp.nlst() if study_file != "audit"]
+ files_list = [os.path.join(STUDY_DIR, study_file) for study_file in ebi_ftp.nlst() if study_file.endswith(".nmrML")]
 
  pool = multiprocessing.pool.Pool(multiprocessing.cpu_count()*8)
  pool.map(_download_mtbls_file, [(f, dl_directory) for f in files_list])