Goal: to find associations between dna data and visual traits.
pip install -r requirements.txt
pip install -e .
Run the notebook in notebooks/run_pipeline.ipynb. You may have to change the input and output directory constants and even the DNA_SCOPE depending on your task.
Run the following command:
python -m gtp.train_whole_genome --chromosome 18 --species erato --color color_3 --wing forewings --epochs 100 --batch_size 32 --exp_name test