fix missing dois in bibliography

see this comment from the JOSS editorial bot: openjournals/joss-reviews#5996 (comment)

paper.bib

@@ -56,6 +56,7 @@ @article{wang2020machine
  number={12},
  pages={4954--4965},
  year={2020},
+ doi={10.1021/acs.chemmater.0c01907.s001},
  publisher={ACS Publications}
 }
 
@@ -80,6 +81,7 @@ @article{ramakrishnan2014quantum
  number={1},
  pages={1--7},
  year={2014},
+ doi={10.1038/sdata.2014.22},
  publisher={Nature Publishing Group}
 }
 
@@ -91,6 +93,7 @@ @article{ruddigkeit_GDB-17_2012
  number={11},
  pages={2864--2875},
  year={2012},
+ doi={10.1021/ci300415d},
  publisher={ACS Publications}
 }
 
@@ -102,6 +105,7 @@ @article{spiekermann2022high
  number={1},
  pages={1--12},
  year={2022},
+ doi={10.1038/s41597-022-01529-6},
  publisher={Nature Publishing Group}
 }
 
@@ -125,6 +129,7 @@ @article{spiekermann2022fast
  number={25},
  pages={3976--3986},
  year={2022},
+ doi={10.1021/acs.jpca.2c02614},
  publisher={ACS Publications}
 }
 
@@ -176,6 +181,7 @@ @article{komp2022progress
  year={2022},
  publisher={Royal Society of Chemistry},
  volume={24},
+ doi={10.1039/d1cp04422b},
  pages={2692--2705},
 }
 
@@ -203,6 +209,7 @@ @article{meredig2018can
  volume={3},
  number={5},
  pages={819--825},
+ doi={10.1039/d1cp04422b},
  year={2018},
  publisher={Royal Society of Chemistry}
 }
@@ -217,6 +224,7 @@ @article{durdy2022random
  volume={1},
  pages={763--778},
  year={2022},
+ doi={10.1039/d2dd00039c},
  publisher={Royal Society of Chemistry}
 }
 
@@ -228,6 +236,7 @@ @article{tricarico2022construction
  title={Construction of Balanced, Chemically Dissimilar Training, Validation and Test Sets for Machine Learning on Molecular Datasets},
  author={Tricarico, Giovanni A. and Hofmans, Johan and Lenselink, Eelke B. and Ramos, Miriam L{\'o}pez and Dr{\'e}anic, Marie-Pierre and Stouten, Pieter FW},
  year={2022},
+ doi={10.26434/chemrxiv-2022-m8l33-v2},
  journal={10.26434/chemrxiv-2022-m8l33}
 }
 
@@ -241,6 +250,7 @@ @article{terrones2023low
  volume={14},
  pages={1419--1433},
  year={2023},
+ doi={10.1039/d2sc06150c},
  publisher={Royal Society of Chemistry}
 }
 
@@ -269,6 +279,7 @@ @article{stuyver2022quantum
  number={8},
  pages={084104},
  year={2022},
+ doi={10.1063/5.0079574},
  publisher={AIP Publishing LLC}
 }
 
@@ -285,6 +296,7 @@ @article{heinen2021toward
  number={6},
  pages={064105},
  year={2021},
+ doi={10.1063/5.0059742},
  publisher={AIP Publishing LLC}
 }
 % we developed a graph-based neural network architecture and applied it to the problem of predicting the viscosity of binary liquid mixtures as a function of composition and temperature
@@ -297,7 +309,8 @@ @article{bilodeau2023machine
  journal={Chem. Eng. J.},
  pages={142454},
  year={2023},
- publisher={Elsevier}
+ publisher={Elsevier},
+ doi={10.2139/ssrn.4289793}
 }
 
 % With this leave-one-reaction-out validation approach, we observed a MAE of 1.00 kcal mol−1 for GPRM3/2 (compared to 0.80 kcal mol−1 from normal cross-validation)
@@ -307,6 +320,7 @@ @article{jorner2021machine
  author={Jorner, Kjell and Brinck, Tore and Norrby, Per-Ola and Buttar, David},
  journal={Chem. Sci.},
  volume={12},
+ doi={10.26434/chemrxiv.12758498},
  number={3},
  pages={1163--1175},
  year={2021},
@@ -331,6 +345,7 @@ @article{bemis1996properties
  number={15},
  pages={2887--2893},
  year={1996},
+ doi={10.1021/jm9602928},
  publisher={ACS Publications}
 }
 
@@ -343,6 +358,7 @@ @article{morgan1965generation
  number={2},
  pages={107--113},
  year={1965},
+ doi={10.1021/c160017a018},
  publisher={ACS Publications}
 }
 
@@ -355,6 +371,7 @@ @article{rogers2010extended
  number={5},
  pages={742--754},
  year={2010},
+ doi={10.1021/ci100050t},
  publisher={ACS Publications}
 }
 
@@ -367,6 +384,7 @@ @article{yang2019analyzing
  number={8},
  pages={3370--3388},
  year={2019},
+ doi={10.1021/acs.jcim.9b00237.s001},
  publisher={ACS Publications}
 }
 
@@ -378,8 +396,8 @@ @article{aimsim_cpc
  pages = {108579},
  year = {2023},
  issn = {0010-4655},
- doi = {https://doi.org/10.1016/j.cpc.2022.108579},
+ doi = {10.1016/j.cpc.2022.108579},
  url = {https://www.sciencedirect.com/science/article/pii/S0010465522002983},
  author = {Himaghna Bhattacharjee and Jackson Burns and Dionisios G. Vlachos},
  keywords = {Cheminformatics, Molecular fingerprints, Similarity, Data visualization, Open-source software},
-}
+}