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Upgrade HOOMD-blue and OpenMM in Colab #1538

Upgrade HOOMD-blue and OpenMM in Colab

Upgrade HOOMD-blue and OpenMM in Colab #1538

Triggered via pull request October 11, 2024 20:43
Status Cancelled
Total duration 33m 47s
Artifacts 1

docker-ci.yml

on: pull_request
forward-flux-sampling
15m 27s
forward-flux-sampling
abf-alanine-dipeptide-openmm
6m 43s
abf-alanine-dipeptide-openmm
spectral-abf-alanine-dipeptide-openmm
4m 35s
spectral-abf-alanine-dipeptide-openmm
abf-tip3p-water-ase
4m 10s
abf-tip3p-water-ase
metad-alanine-dipeptide-openmm
3m 46s
metad-alanine-dipeptide-openmm
alanine-dipeptide-openmm-mpi
8m 34s
alanine-dipeptide-openmm-mpi
cv-pucker-openmm-unbiased
3m 10s
cv-pucker-openmm-unbiased
cv-ermsd-openmm-unbiased
3m 39s
cv-ermsd-openmm-unbiased
cv-ermsd-cg-openmm-unbiased
4m 13s
cv-ermsd-cg-openmm-unbiased
alanine-dipeptide-string
8m 23s
alanine-dipeptide-string
openmm-nacl-metad-displacement
3m 38s
openmm-nacl-metad-displacement
metad-hoomd
3m 24s
metad-hoomd
funn-butane-hoomd
3m 53s
funn-butane-hoomd
cff-butane-hoomd
3m 44s
cff-butane-hoomd
harmonic-bias-hoomd
0s
harmonic-bias-hoomd
unbiased-hoomd
0s
unbiased-hoomd
umbrella-integration-hoomd
0s
umbrella-integration-hoomd
improved-string-hoomd
0s
improved-string-hoomd
umbrella-integration-hoomd-mpi
3m 13s
umbrella-integration-hoomd-mpi
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Annotations

12 errors and 15 warnings
forward-flux-sampling
The run was canceled by @pabloferz.
umbrella-integration-hoomd-mpi
The run was canceled by @pabloferz.
umbrella-integration-hoomd-mpi
The operation was canceled.
metad-alanine-dipeptide-openmm
The run was canceled by @pabloferz.
alanine-dipeptide-openmm-mpi
The run was canceled by @pabloferz.
unbiased-hoomd
The run was canceled by @pabloferz.
unbiased-hoomd
The operation was canceled.
metad-hoomd
The run was canceled by @pabloferz.
metad-hoomd
The operation was canceled.
harmonic-bias-hoomd
The run was canceled by @pabloferz.
improved-string-hoomd
The run was canceled by @pabloferz.
umbrella-integration-hoomd
The run was canceled by @pabloferz.
build
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3, docker/setup-buildx-action@v2, docker/build-push-action@v3, actions/upload-artifact@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
funn-butane-hoomd
The following actions use a deprecated Node.js version and will be forced to run on node20: docker/setup-buildx-action@v2, actions/download-artifact@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
cv-ermsd-openmm-unbiased
The following actions use a deprecated Node.js version and will be forced to run on node20: docker/setup-buildx-action@v2, actions/download-artifact@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
cv-ermsd-cg-openmm-unbiased
The following actions use a deprecated Node.js version and will be forced to run on node20: docker/setup-buildx-action@v2, actions/download-artifact@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
abf-alanine-dipeptide-openmm
The following actions use a deprecated Node.js version and will be forced to run on node20: docker/setup-buildx-action@v2, actions/download-artifact@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
abf-tip3p-water-ase
The following actions use a deprecated Node.js version and will be forced to run on node20: docker/setup-buildx-action@v2, actions/download-artifact@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
cv-pucker-openmm-unbiased
The following actions use a deprecated Node.js version and will be forced to run on node20: docker/setup-buildx-action@v2, actions/download-artifact@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
openmm-nacl-metad-displacement
The following actions use a deprecated Node.js version and will be forced to run on node20: docker/setup-buildx-action@v2, actions/download-artifact@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
alanine-dipeptide-string
The following actions use a deprecated Node.js version and will be forced to run on node20: docker/setup-buildx-action@v2, actions/download-artifact@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
cff-butane-hoomd
The following actions use a deprecated Node.js version and will be forced to run on node20: docker/setup-buildx-action@v2, actions/download-artifact@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
spectral-abf-alanine-dipeptide-openmm
The following actions use a deprecated Node.js version and will be forced to run on node20: docker/setup-buildx-action@v2, actions/download-artifact@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
harmonic-bias-hoomd
Runner GitHub Actions 4 did not respond to a cancelation request with 00:05:00.
improved-string-hoomd
Runner GitHub Actions 3 did not respond to a cancelation request with 00:05:00.
Deprecation notice: v1, v2, and v3 of the artifact actions
The following artifacts were uploaded using a version of actions/upload-artifact that is scheduled for deprecation: "pysages". Please update your workflow to use v4 of the artifact actions. Learn more: https://github.blog/changelog/2024-04-16-deprecation-notice-v3-of-the-artifact-actions/
umbrella-integration-hoomd
Runner GitHub Actions 6 did not respond to a cancelation request with 00:05:00.

Artifacts

Produced during runtime
Name Size
pysages Expired
3.44 GB