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EnsembleSummary plot recipe doesn't respect idxs kwarg #697

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jonathanfischer97 opened this issue May 23, 2024 · 8 comments
Open

EnsembleSummary plot recipe doesn't respect idxs kwarg #697

jonathanfischer97 opened this issue May 23, 2024 · 8 comments
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@jonathanfischer97
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Problem

  • When plotting with:
ensemble_summary = EnsembleSummary(sim)

plot(ensemble_summary; idxs = 1)

the resulting plot includes all state variables rather than just the first.

  • Doesn't work with symbolic indexing either

No issue with EnsembleSimulation, just EnsembleSummary.

Diagnostic info

Output of using Pkg; Pkg.status()

  [c7e460c6] ArgParse v1.2.0
  [6e4b80f9] BenchmarkTools v1.5.0
  [0f109fa4] BifurcationKit v0.3.3
  [336ed68f] CSV v0.10.14
  [13f3f980] CairoMakie v0.12.2
  [479239e8] Catalyst v13.5.1
  [324d7699] CategoricalArrays v0.10.8
  [aaaa29a8] Clustering v0.15.7
  [35d6a980] ColorSchemes v3.25.0
  [b0b7db55] ComponentArrays v0.15.13
  [f68482b8] Cthulhu v2.12.5
  [717857b8] DSP v0.7.9
  [a93c6f00] DataFrames v1.6.1
  [1313f7d8] DataFramesMeta v0.15.2
  [85a47980] Dictionaries v0.4.2
⌅ [459566f4] DiffEqCallbacks v2.37.0
  [0c46a032] DifferentialEquations v7.13.0
  [0703355e] DimensionalData v0.27.3
  [b4f34e82] Distances v0.10.11
  [31c24e10] Distributions v0.25.108
  [634d3b9d] DrWatson v2.15.0
  [06fc5a27] DynamicQuantities v0.14.0
  [61744808] DynamicalSystems v3.3.14
  [86b6b26d] Evolutionary v0.11.2 `~/.julia/dev/Evolutionary`
  [7a1cc6ca] FFTW v1.8.0
  [f6369f11] ForwardDiff v0.10.36
  [e9467ef8] GLMakie v0.10.2
  [f213a82b] HomotopyContinuation v2.9.3
  [5903a43b] Infiltrator v1.8.2
  [b964fa9f] LaTeXStrings v1.3.1
  [2ee39098] LabelledArrays v1.16.0
  [23fbe1c1] Latexify v0.16.3
⌅ [5078a376] LazyArrays v1.10.0
  [33e6dc65] MKL v0.6.3
⌅ [961ee093] ModelingToolkit v8.75.0
  [6f286f6a] MultivariateStats v0.10.2
  [b8a86587] NearestNeighbors v0.4.16
⌃ [8913a72c] NonlinearSolve v3.11.0
  [5fb14364] OhMyREPL v0.5.24
  [67456a42] OhMyThreads v0.5.2
  [7f7a1694] Optimization v3.25.0 `~/.julia/dev/Optimization`
  [cb963754] OptimizationEvolutionary v0.3.0 `~/.julia/dev/Optimization/lib/OptimizationEvolutionary`
  [1dea7af3] OrdinaryDiffEq v6.78.0
  [f0f68f2c] PlotlyJS v0.18.13
  [91a5bcdd] Plots v1.40.4
  [c3e4b0f8] Pluto v0.19.42
  [2dfb63ee] PooledArrays v1.4.3
  [08abe8d2] PrettyTables v2.3.1
  [92933f4c] ProgressMeter v1.10.0
  [295af30f] Revise v3.5.14
  [0bca4576] SciMLBase v2.38.0
  [c0aeaf25] SciMLOperators v0.3.8
⌃ [1ed8b502] SciMLSensitivity v7.56.0
  [efcf1570] Setfield v1.1.1
  [90137ffa] StaticArrays v1.9.4
  [2913bbd2] StatsBase v0.34.3
  [f3b207a7] StatsPlots v0.15.7
⌃ [9672c7b4] SteadyStateDiffEq v2.0.1
  [2efcf032] SymbolicIndexingInterface v0.3.21
  [d1185830] SymbolicUtils v1.6.0
  [0c5d862f] Symbolics v5.28.0
  [22787eb5] Term v2.0.6
  [811555cd] ThreadPinning v0.7.22
  [b8865327] UnicodePlots v3.6.4
  [8ba89e20] Distributed
  [b77e0a4c] InteractiveUtils
  [37e2e46d] LinearAlgebra
  [9a3f8284] Random
  [10745b16] Statistics v1.10.0
Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated`

Output of using Pkg; Pkg.status(; mode = PKGMODE_MANIFEST)

⌅ [47edcb42] ADTypes v0.2.7
  [621f4979] AbstractFFTs v1.5.0
  [398f06c4] AbstractLattices v0.3.0
  [1520ce14] AbstractTrees v0.4.5
  [7d9f7c33] Accessors v0.1.36
  [79e6a3ab] Adapt v4.0.4
  [66dad0bd] AliasTables v1.1.3
  [27a7e980] Animations v0.4.1
⌅ [fb37089c] Arblib v0.8.1
  [c7e460c6] ArgParse v1.2.0
⌅ [ec485272] ArnoldiMethod v0.2.0
⌅ [7d9fca2a] Arpack v0.5.3
  [4fba245c] ArrayInterface v7.10.0
  [4c555306] ArrayLayouts v1.9.3
  [bf4720bc] AssetRegistry v0.1.0
  [a9b6321e] Atomix v0.1.0
  [f3fd9213] Attractors v1.17.0
  [67c07d97] Automa v1.0.3
⌃ [13072b0f] AxisAlgorithms v1.0.1
  [39de3d68] AxisArrays v0.4.7
  [aae01518] BandedMatrices v1.7.0
  [198e06fe] BangBang v0.4.2
  [6e4b80f9] BenchmarkTools v1.5.0
  [0f109fa4] BifurcationKit v0.3.3
  [e2ed5e7c] Bijections v0.1.6
  [d1d4a3ce] BitFlags v0.1.8
  [62783981] BitTwiddlingConvenienceFunctions v0.1.5
  [a134a8b2] BlackBoxOptim v0.6.3
  [ad839575] Blink v0.12.9
⌅ [8e7c35d0] BlockArrays v0.16.43
  [764a87c0] BoundaryValueDiffEq v5.7.1
  [fa961155] CEnum v0.5.0
  [2a0fbf3d] CPUSummary v0.2.5
  [a9c8d775] CPUTime v1.0.0
  [96374032] CRlibm v1.0.1
  [00ebfdb7] CSTParser v3.4.3
  [336ed68f] CSV v0.10.14
  [159f3aea] Cairo v1.0.5
  [13f3f980] CairoMakie v0.12.2
  [49dc2e85] Calculus v0.5.1
  [7057c7e9] Cassette v0.3.13
  [479239e8] Catalyst v13.5.1
  [324d7699] CategoricalArrays v0.10.8
  [8be319e6] Chain v0.6.0
  [082447d4] ChainRules v1.66.0
  [d360d2e6] ChainRulesCore v1.23.0
  [608a59af] ChaosTools v3.1.2
  [ae650224] ChunkSplitters v2.4.2
  [fb6a15b2] CloseOpenIntervals v0.1.12
  [aaaa29a8] Clustering v0.15.7
  [da1fd8a2] CodeTracking v1.3.5
  [944b1d66] CodecZlib v0.7.4
  [a2cac450] ColorBrewer v0.4.0
  [35d6a980] ColorSchemes v3.25.0
  [3da002f7] ColorTypes v0.11.5
  [c3611d14] ColorVectorSpace v0.10.0
  [5ae59095] Colors v0.12.11
  [861a8166] Combinatorics v1.0.2
  [a80b9123] CommonMark v0.8.12
  [38540f10] CommonSolve v0.2.4
  [bbf7d656] CommonSubexpressions v0.3.0
  [34da2185] Compat v4.15.0
  [ab4b797d] ComplexityMeasures v3.4.3
  [b0b7db55] ComponentArrays v0.15.13
  [b152e2b5] CompositeTypes v0.1.4
  [a33af91c] CompositionsBase v0.1.2
  [2569d6c7] ConcreteStructs v0.2.3
  [f0e56b4a] ConcurrentUtilities v2.4.1
  [5218b696] Configurations v0.17.6
  [88cd18e8] ConsoleProgressMonitor v0.1.2
  [187b0558] ConstructionBase v1.5.5
  [d38c429a] Contour v0.6.3
  [adafc99b] CpuId v0.3.1
  [a8cc5b0e] Crayons v4.1.1
  [f68482b8] Cthulhu v2.12.5
  [717857b8] DSP v0.7.9
  [9a962f9c] DataAPI v1.16.0
  [a93c6f00] DataFrames v1.6.1
  [1313f7d8] DataFramesMeta v0.15.2
  [864edb3b] DataStructures v0.18.20
  [e2d170a0] DataValueInterfaces v1.0.0
  [927a84f5] DelaunayTriangulation v1.0.3
  [bcd4f6db] DelayDiffEq v5.47.3
  [5732040d] DelayEmbeddings v2.7.4
  [8bb1440f] DelimitedFiles v1.9.1
  [85a47980] Dictionaries v0.4.2
  [2b5f629d] DiffEqBase v6.151.1
⌅ [459566f4] DiffEqCallbacks v2.37.0
  [77a26b50] DiffEqNoiseProcess v5.21.0
  [163ba53b] DiffResults v1.1.0
  [b552c78f] DiffRules v1.15.1
  [0c46a032] DifferentialEquations v7.13.0
  [0703355e] DimensionalData v0.27.3
  [b4f34e82] Distances v0.10.11
  [31c24e10] Distributions v0.25.108
  [ffbed154] DocStringExtensions v0.9.3
⌅ [5b8099bc] DomainSets v0.6.7
  [634d3b9d] DrWatson v2.15.0
  [fa6b7ba4] DualNumbers v0.6.8
  [7c1d4256] DynamicPolynomials v0.5.7
  [06fc5a27] DynamicQuantities v0.14.0
  [61744808] DynamicalSystems v3.3.14
  [6e36e845] DynamicalSystemsBase v3.8.3
  [fdbdab4c] ElasticArrays v1.2.12
  [da5c29d0] EllipsisNotation v1.8.0
  [4e289a0a] EnumX v1.0.4
⌅ [7da242da] Enzyme v0.11.20
⌅ [f151be2c] EnzymeCore v0.6.6
  [90fa49ef] ErrorfreeArithmetic v0.5.2
  [86b6b26d] Evolutionary v0.11.2 `~/.julia/dev/Evolutionary`
⌃ [429591f6] ExactPredicates v2.2.5
  [460bff9d] ExceptionUnwrapping v0.1.10
  [d4d017d3] ExponentialUtilities v1.26.1
  [e2ba6199] ExprTools v0.1.10
  [21656369] ExpressionExplorer v1.0.2
  [55351af7] ExproniconLite v0.10.8
  [411431e0] Extents v0.1.2
  [c87230d0] FFMPEG v0.4.1
  [7a1cc6ca] FFTW v1.8.0
  [9d29842c] FastAlmostBandedMatrices v0.1.1
  [7034ab61] FastBroadcast v0.2.8
  [9aa1b823] FastClosures v0.3.2
  [442a2c76] FastGaussQuadrature v1.0.2
  [29a986be] FastLapackInterface v2.0.4
  [fa42c844] FastRounding v0.3.1
  [5789e2e9] FileIO v1.16.3
  [8fc22ac5] FilePaths v0.8.3
  [48062228] FilePathsBase v0.9.21
  [1a297f60] FillArrays v1.11.0
  [6a86dc24] FiniteDiff v2.23.1
  [53c48c17] FixedPointNumbers v0.8.5
  [1eca21be] FoldingTrees v1.2.1
  [1fa38f19] Format v1.3.7
  [f6369f11] ForwardDiff v0.10.36
  [4665ce21] FractalDimensions v1.8.1
  [b38be410] FreeType v4.1.1
  [663a7486] FreeTypeAbstraction v0.10.3
  [f62d2435] FunctionProperties v0.1.2
  [069b7b12] FunctionWrappers v1.1.3
  [77dc65aa] FunctionWrappersWrappers v0.1.3
  [de31a74c] FunctionalCollections v0.5.0
  [d9f16b24] Functors v0.4.10
  [fb4132e2] FuzzyCompletions v0.5.4
  [f7f18e0c] GLFW v3.4.1
  [e9467ef8] GLMakie v0.10.2
  [0c68f7d7] GPUArrays v10.1.1
  [46192b85] GPUArraysCore v0.1.6
⌅ [61eb1bfa] GPUCompiler v0.25.0
  [28b8d3ca] GR v0.73.5
  [c145ed77] GenericSchur v0.5.4
  [cf35fbd7] GeoInterface v1.3.4
  [5c1252a2] GeometryBasics v0.4.11
  [c27321d9] Glob v1.3.1
  [a2bd30eb] Graphics v1.1.2
⌃ [86223c79] Graphs v1.9.0
  [3955a311] GridLayoutBase v0.11.0
  [42e2da0e] Grisu v1.0.2
  [cd3eb016] HTTP v1.10.8
  [9fb69e20] Hiccup v0.2.2
  [eafb193a] Highlights v0.5.2
  [f213a82b] HomotopyContinuation v2.9.3
  [3e5b6fbb] HostCPUFeatures v0.1.16
  [34004b35] HypergeometricFunctions v0.3.23
  [ac1192a8] HypertextLiteral v0.9.5
  [09f84164] HypothesisTests v0.11.0
  [7869d1d1] IRTools v0.4.14
  [615f187c] IfElse v0.1.1
  [2803e5a7] ImageAxes v0.6.11
  [c817782e] ImageBase v0.1.7
  [a09fc81d] ImageCore v0.10.2
  [82e4d734] ImageIO v0.6.8
  [bc367c6b] ImageMetadata v0.9.9
  [313cdc1a] Indexing v1.1.1
  [9b13fd28] IndirectArrays v1.0.0
  [5903a43b] Infiltrator v1.8.2
  [d25df0c9] Inflate v0.1.4
  [22cec73e] InitialValues v0.3.1
  [842dd82b] InlineStrings v1.4.0
  [18e54dd8] IntegerMathUtils v0.1.2
  [85a1e053] Interfaces v0.3.0
⌅ [a98d9a8b] Interpolations v0.14.0
⌅ [d1acc4aa] IntervalArithmetic v0.20.9
  [d2bf35a9] IntervalRootFinding v0.5.11
  [8197267c] IntervalSets v0.7.10
  [524e6230] IntervalTrees v1.1.0
  [3587e190] InverseFunctions v0.1.14
  [41ab1584] InvertedIndices v1.3.0
  [92d709cd] IrrationalConstants v0.2.2
  [f1662d9f] Isoband v0.1.1
  [c8e1da08] IterTools v1.10.0
  [42fd0dbc] IterativeSolvers v0.9.4
  [82899510] IteratorInterfaceExtensions v1.0.0
  [033835bb] JLD2 v0.4.48
  [1019f520] JLFzf v0.1.7
  [692b3bcd] JLLWrappers v1.5.0
  [97c1335a] JSExpr v0.5.4
  [682c06a0] JSON v0.21.4
  [b835a17e] JpegTurbo v0.1.5
  [98e50ef6] JuliaFormatter v1.0.56
  [aa1ae85d] JuliaInterpreter v0.9.31
  [70703baa] JuliaSyntax v0.4.8
  [ccbc3e58] JumpProcesses v9.11.1
  [ef3ab10e] KLU v0.6.0
⌃ [63c18a36] KernelAbstractions v0.9.18
  [5ab0869b] KernelDensity v0.6.9
  [ba0b0d4f] Krylov v0.9.6
⌅ [0b1a1467] KrylovKit v0.6.1
  [5be7bae1] LBFGSB v0.4.1
⌅ [929cbde3] LLVM v6.6.3
  [8ac3fa9e] LRUCache v1.6.1
  [b964fa9f] LaTeXStrings v1.3.1
  [2ee39098] LabelledArrays v1.16.0
  [984bce1d] LambertW v0.4.6
  [23fbe1c1] Latexify v0.16.3
  [10f19ff3] LayoutPointers v0.1.15
  [0e77f7df] LazilyInitializedFields v1.2.2
  [50d2b5c4] Lazy v0.15.1
⌅ [5078a376] LazyArrays v1.10.0
  [8cdb02fc] LazyModules v0.3.1
  [1d6d02ad] LeftChildRightSiblingTrees v0.2.0
  [2d8b4e74] LevyArea v1.0.0
  [9c8b4983] LightXML v0.9.1
  [d3d80556] LineSearches v7.2.0
  [9b3f67b0] LinearAlgebraX v0.2.7
  [7a12625a] LinearMaps v3.11.2
  [7ed4a6bd] LinearSolve v2.30.0
  [2ab3a3ac] LogExpFunctions v0.3.27
  [e6f89c97] LoggingExtras v1.0.3
  [fc60dff9] LombScargle v1.0.3
  [bdcacae8] LoopVectorization v0.12.170
  [6f1432cf] LoweredCodeUtils v2.4.6
  [6c6e2e6c] MIMEs v0.1.4
  [33e6dc65] MKL v0.6.3
  [d8e11817] MLStyle v0.4.17
  [1914dd2f] MacroTools v0.5.13
  [ee78f7c6] Makie v0.21.2
  [20f20a25] MakieCore v0.8.2
  [36869731] Malt v1.1.1
  [d125e4d3] ManualMemory v0.1.8
  [dbb5928d] MappedArrays v0.4.2
  [299715c1] MarchingCubes v0.1.9
  [0a4f8689] MathTeXEngine v0.6.0
⌅ [a3b82374] MatrixFactorizations v2.2.0
  [bb5d69b7] MaybeInplace v0.1.2
  [739be429] MbedTLS v1.1.9
  [eff96d63] Measurements v2.11.0
  [442fdcdd] Measures v0.3.2
  [7269a6da] MeshIO v0.4.11
  [e1d29d7a] Missings v1.2.0
  [291d046c] MixedSubdivisions v1.1.3
⌅ [961ee093] ModelingToolkit v8.75.0
  [66fc600b] ModernGL v1.1.7
  [7475f97c] Mods v2.2.4
  [e94cdb99] MosaicViews v0.3.4
  [99f44e22] MsgPack v1.2.1
  [46d2c3a1] MuladdMacro v0.2.4
  [3b2b4ff1] Multisets v0.4.4
  [102ac46a] MultivariatePolynomials v0.5.5
  [6f286f6a] MultivariateStats v0.10.2
  [ffc61752] Mustache v1.0.19
  [d8a4904e] MutableArithmetics v1.4.4
  [a975b10e] Mux v1.0.2
  [1c23619d] MyterialColors v0.3.0
  [d41bc354] NLSolversBase v7.8.3
  [2774e3e8] NLsolve v4.5.1
  [872c559c] NNlib v0.9.17
  [77ba4419] NaNMath v1.0.2
  [b8a86587] NearestNeighbors v0.4.16
  [645ca80c] Neighborhood v0.2.4
  [f09324ee] Netpbm v1.1.1
⌃ [8913a72c] NonlinearSolve v3.11.0
  [d8793406] ObjectFile v0.4.1
  [510215fc] Observables v0.5.5
  [6fe1bfb0] OffsetArrays v1.14.0
  [5fb14364] OhMyREPL v0.5.24
  [67456a42] OhMyThreads v0.5.2
  [52e1d378] OpenEXR v0.3.2
  [4d8831e6] OpenSSL v1.4.3
  [429524aa] Optim v1.9.4
  [3bd65402] Optimisers v0.3.3
  [7f7a1694] Optimization v3.25.0 `~/.julia/dev/Optimization`
⌅ [bca83a33] OptimizationBase v0.0.7
  [cb963754] OptimizationEvolutionary v0.3.0 `~/.julia/dev/Optimization/lib/OptimizationEvolutionary`
  [bac558e1] OrderedCollections v1.6.3
  [1dea7af3] OrdinaryDiffEq v6.78.0
  [90014a1f] PDMats v0.11.31
  [f57f5aa1] PNGFiles v0.4.3
  [65ce6f38] PackageExtensionCompat v1.0.2
  [19eb6ba3] Packing v0.5.0
  [5432bcbf] PaddedViews v0.5.12
  [d96e819e] Parameters v0.12.3
  [69de0a69] Parsers v2.8.1
  [2ae35dd2] Permutations v0.4.21
  [fa939f87] Pidfile v1.3.0
  [b98c9c47] Pipe v1.3.0
  [eebad327] PkgVersion v0.3.3
  [ccf2f8ad] PlotThemes v3.1.0
  [995b91a9] PlotUtils v1.4.1
  [a03496cd] PlotlyBase v0.8.19
  [f0f68f2c] PlotlyJS v0.18.13
  [f2990250] PlotlyKaleido v2.2.4
  [91a5bcdd] Plots v1.40.4
  [c3e4b0f8] Pluto v0.19.42
  [72656b73] PlutoDependencyExplorer v1.0.4
  [e409e4f3] PoissonRandom v0.4.4
  [f517fe37] Polyester v0.7.14
  [1d0040c9] PolyesterWeave v0.2.1
  [647866c9] PolygonOps v0.1.2
⌅ [f27b6e38] Polynomials v3.2.4
  [2dfb63ee] PooledArrays v1.4.3
  [85a6dd25] PositiveFactorizations v0.2.4
  [d236fae5] PreallocationTools v0.4.21
  [91cefc8d] PrecompileSignatures v3.0.3
  [aea7be01] PrecompileTools v1.2.1
  [31e2f376] PredefinedDynamicalSystems v1.2.0
  [21216c6a] Preferences v1.4.3
  [08abe8d2] PrettyTables v2.3.1
  [27ebfcd6] Primes v0.5.6
  [33c8b6b6] ProgressLogging v0.1.4
  [92933f4c] ProgressMeter v1.10.0
  [01f381cc] ProjectiveVectors v1.1.4
  [43287f4e] PtrArrays v1.1.0
  [4b34888f] QOI v1.0.0
  [1fd47b50] QuadGK v2.9.4
  [74087812] Random123 v1.7.0
  [e6cf234a] RandomNumbers v1.5.3
  [b3c3ace0] RangeArrays v0.3.2
  [c84ed2f1] Ratios v0.4.5
  [c1ae055f] RealDot v0.1.0
  [3cdcf5f2] RecipesBase v1.3.4
  [01d81517] RecipesPipeline v0.6.12
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Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m`

Output of versioninfo()

julia> versioninfo()
Julia Version 1.10.3
Commit 0b4590a5507 (2024-04-30 10:59 UTC)
Build Info:
  Official https://julialang.org/ release
Platform Info:
  OS: Linux (x86_64-linux-gnu)
  CPU: 36 × Intel(R) Core(TM) i9-10980XE CPU @ 3.00GHz
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-15.0.7 (ORCJIT, cascadelake)
Threads: 18 default, 0 interactive, 9 GC (on 36 virtual cores)
Environment:
  LD_LIBRARY_PATH = /tmp/.mount_cursordSk5xV/usr/lib:
  JULIA_NUM_THREADS = 18
  JULIA_EDITOR = code
@jonathanfischer97 jonathanfischer97 added the bug Something isn't working label May 23, 2024
@AayushSabharwal
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I may be misunderstanding EnsembleSummary here, but looking at the plot recipe it seems that the trajectories keyword argument is doing what you want here. No idea why it's not called idxs, since at the EnsembleSummary level there are no trajectories.

@jonathanfischer97
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Yep, you're right, just tested it. Must've been a typo, I'll make a PR

@jonathanfischer97
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Made a PR, but in looking at the code, had a bunch of other thoughts which I'll repost here for posterity since they are more appropriate for an issue than PR comment:

"

Further considerations or to-dos

  1. Was the original intention of the EnsembleSummary recipes to allow users to choose/truncate the amount of trajectories that statistics are plotted over, similar to EnsembleSimulation? (Explains the mixup with idxs)

    • If so, that functionality is missing and should be added
  2. Symbolic indexing does not work any of the recipes for either EnsembleSimulation or EnsembleSummary.

    • Should be added to match the recipe of AbstractSolution.
  3. Plotting state spaces via giving idxs as a Tuple rather than a Vector does not work.

    • Should also be added to match the non-ensemble solution plotting recipes, if intended by the maintainers.
  4. Makie EnsembleSummary recipe doesn't show transparent ranges:
    image
    Shown are 100 trajectories.

  5. No user-exposed way to set the color map of EnsembleSimulation trajectories? Would like an easy way to set it to something other than random, like this:

image "

@ChrisRackauckas
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Was the original intention of the EnsembleSummary recipes to allow users to choose/truncate the amount of trajectories that statistics are plotted over, similar to EnsembleSimulation? (Explains the mixup with idxs)

Yes. Both used the idxs kwarg before, so it was split so that idxs is the new vars, but I don't think all got fixed on the ensemble side when that change happened. Now that there's trajectories and idxs, the meaning of the two is more clear and non-overlapping, but we didn't ever complete this.

Symbolic indexing does not work any of the recipes for either EnsembleSimulation or EnsembleSummary.

Agreed, it's a missing part of the interface here.

Plotting state spaces via giving idxs as a Tuple rather than a Vector does not work.

Yeah that's unintentional, it should get fixed.

Makie EnsembleSummary recipe doesn't show transparent ranges:

That's unintentional. I don't use Makie so I'm not 100% how to handle that.

No user-exposed way to set the color map of EnsembleSimulation trajectories? Would like an easy way to set it to something other than random, like this:

That would be nice. I'm not sure how to do that with recipes though.

ChrisRackauckas added a commit that referenced this issue May 29, 2024
@AayushSabharwal
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Can this PR be closed now that #700 is merged?

@ChrisRackauckas
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We should get issues on the other points though, those are reasonable asks.

@AayushSabharwal
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Was the original intention of the EnsembleSummary recipes to allow users to choose/truncate the amount of trajectories that statistics are plotted over

Doesn't EnsembleSummary reduce over trajectories? The original trajectories are not retained, so we can't just plot over a subset of them.

@jonathanfischer97
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Was the original intention of the EnsembleSummary recipes to allow users to choose/truncate the amount of trajectories that statistics are plotted over

Doesn't EnsembleSummary reduce over trajectories? The original trajectories are not retained, so we can't just plot over a subset of them.

The trajectories aren't maintained in the .u field here?

struct EnsembleSummary{T, N, Tt, S, S2, S3, S4, S5} <: AbstractEnsembleSolution{T, N, S}
    t::Tt
    u::S
    v::S2
    med::S3
    qlow::S4
    qhigh::S5
    num_monte::Int
    elapsedTime::Float64
    converged::Bool
end

Though allowing subsetting of the trajectories reduced over is definitely low priority compared to the other issues I think.

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