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.gitignore
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#ignore binary files
**/*.o
**/ui_*.*
**/moc_*.*
**/qrc_*.*
**/Makefile
**/*pro.user
**/*.autosave
**/*.sln
**/*.sdf
**/*.user
**/*vcxproj*
**/*~
**/*.swp
**/*.suo
**/*.pdb
**/*.obj
**/*.Debug
**/*.zip
**/ipch
#ignore symlink folder
bin
v3d_main
**/v3d_plugins/neurontracing_neutube/src_neutube
**/Makefile*
**/Makefile
**/release/*
# Byte-compiled / optimized / DLL files
__pycache__/
*.py[cod]
*$py.class
# C extensions
*.so
# Distribution / packaging
.Python
build/
develop-eggs/
dist/
downloads/
eggs/
.eggs/
lib/
lib64/
parts/
sdist/
var/
wheels/
*.egg-info/
.installed.cfg
*.egg
MANIFEST
# create by macos
*DS_Store
# create by qmake
*qmake.stash
# PyInstaller
# Usually these files are written by a python script from a template
# before PyInstaller builds the exe, so as to inject date/other infos into it.
*.manifest
*.spec
# Installer logs
pip-log.txt
pip-delete-this-directory.txt
# Unit test / coverage reports
htmlcov/
.tox/
.coverage
.coverage.*
.cache
nosetests.xml
coverage.xml
*.cover
.hypothesis/
.pytest_cache/
# Translations
*.mo
*.pot
# Django stuff:
*.log
local_settings.py
db.sqlite3
# Flask stuff:
instance/
.webassets-cache
# Scrapy stuff:
.scrapy
# Sphinx documentation
docs/_build/
# PyBuilder
target/
# Jupyter Notebook
.ipynb_checkpoints
# pyenv
.python-version
# celery beat schedule file
celerybeat-schedule
# SageMath parsed files
*.sage.py
# Environments
.env
.venv
env/
venv/
ENV/
env.bak/
venv.bak/
# Spyder project settings
.spyderproject
.spyproject
# Rope project settings
.ropeproject
# mkdocs documentation
/site
# mypy
.mypy_cache/
# data
*.swc
*.npy
*.mp4
*.tiff
# pycharm
.idea/
*.mp4
# RL agent logfiles
hackathon/profundo/agent/train_log
*.meta
hackathon/ChenMY/somaDetection/debug/link.write.1.tlog
hackathon/ChenMY/SomaDetection/Debug/pch.obj
hackathon/ChenMY/somaDetection/debug/somaDetection.lastbuildstate
hackathon/ChenMY/SomaDetection/Debug/SomaDetection.log
hackathon/ChenMY/SomaDetection/Debug/SomaDetection.obj
hackathon/ChenMY/SomaDetection/Debug/SomaDetection.pch
hackathon/ChenMY/SomaDetection/Debug/SomaDetection.tlog/CL.command.1.tlog
hackathon/ChenMY/SomaDetection/Debug/SomaDetection.tlog/CL.read.1.tlog
hackathon/ChenMY/SomaDetection/Debug/SomaDetection.tlog/CL.write.1.tlog
hackathon/ChenMY/SomaDetection/Debug/SomaDetection.tlog/link.command.1.tlog
hackathon/ChenMY/SomaDetection/Debug/SomaDetection.tlog/link.read.1.tlog
hackathon/ChenMY/SomaDetection/Debug/SomaDetection.tlog/link.write.1.tlog
hackathon/ChenMY/SomaDetection/Debug/SomaDetection.tlog/SomaDetection.lastbuildstate
hackathon/ChenMY/somaDetection/debug/somaDetection.unsuccessfulbuild
hackathon/ChenMY/somaDetection/debug/somaDetection.write.1.tlog
hackathon/ChenMY/SomaDetection/Debug/vc141.idb
hackathon/ChenMY/SomaDetection/Debug/vc141.pdb
hackathon/ChenMY/somaDetection/fastmarching_dt.h
hackathon/ChenMY/SomaDetection/head.h
hackathon/ChenMY/somaDetection/heap.h
hackathon/ChenMY/somaDetection/log.txt
hackathon/ChenMY/somaDetection/my_surf_objs.cpp
hackathon/ChenMY/somaDetection/my_surf_objs.h
hackathon/ChenMY/somaDetection/somaDetection.opensdf
hackathon/ChenMY/SomaDetection/SomaDetection.vcxproj
hackathon/ChenMY/SomaDetection/SomaDetection.vcxproj.filters
hackathon/ChenMY/SomaDetection/SomaDetection.vcxproj.user
hackathon/ChenMY/SomaDetection/somaDetection_plugin.cpp
hackathon/ChenMY/somaDetection/test.h
released_plugins/v3d_plugins/bigneuron_siqi_stalker_v3d/lib/ITK_include/vnl/vnl_numeric_traits.h
released_plugins/v3d_plugins/bigneuron_siqi_stalker_v3d/lib/ITK_include/vnl/vnl_vector.h
released_plugins/v3d_plugins/crop3D_image_series/adjacency_list.hpp
released_plugins/v3d_plugins/crop3D_image_series/cropped3DImageSeries_plugin.cpp
released_plugins/v3d_plugins/crop3D_image_series/kruskal_min_spanning_tree.hpp
released_plugins/v3d_plugins/crop3D_image_series/prim_minimum_spanning_tree.hpp
released_plugins/v3d_plugins/istitch/y_imglib.h
hackathon/ChenMY/SomaDetection/Debug/pch.obj
hackathon/ChenMY/SomaDetection/Debug/SomaDetection.log
hackathon/ChenMY/SomaDetection/Debug/SomaDetection.obj
hackathon/ChenMY/SomaDetection/Debug/SomaDetection.pch
hackathon/ChenMY/SomaDetection/Debug/SomaDetection.tlog/CL.command.1.tlog
hackathon/ChenMY/SomaDetection/Debug/SomaDetection.tlog/CL.read.1.tlog
hackathon/ChenMY/SomaDetection/Debug/SomaDetection.tlog/CL.write.1.tlog
hackathon/ChenMY/SomaDetection/Debug/SomaDetection.tlog/link.command.1.tlog
hackathon/ChenMY/SomaDetection/Debug/SomaDetection.tlog/link.read.1.tlog
hackathon/ChenMY/SomaDetection/Debug/SomaDetection.tlog/link.write.1.tlog
hackathon/ChenMY/SomaDetection/Debug/SomaDetection.tlog/SomaDetection.lastbuildstate
hackathon/ChenMY/SomaDetection/Debug/vc141.idb
hackathon/ChenMY/SomaDetection/Debug/vc141.pdb
hackathon/ChenMY/SomaDetection/head.h
hackathon/ChenMY/SomaDetection/SomaDetection.vcxproj
hackathon/ChenMY/SomaDetection/SomaDetection.vcxproj.filters
hackathon/ChenMY/SomaDetection/SomaDetection.vcxproj.user
hackathon/ChenMY/SomaDetection/somaDetection_plugin.cpp
released_plugins/v3d_plugins/bigneuron_siqi_stalker_v3d/lib/ITK_include/vnl/vnl_numeric_traits.h
released_plugins/v3d_plugins/bigneuron_siqi_stalker_v3d/lib/ITK_include/vnl/vnl_vector.h
released_plugins/v3d_plugins/crop3D_image_series/cropped3DImageSeries_plugin.cpp
released_plugins/v3d_plugins/istitch/y_imglib.h
hackathon/ChenMY/SomaDetection/Debug/pch.obj
hackathon/ChenMY/SomaDetection/Debug/SomaDetection.log
hackathon/ChenMY/SomaDetection/Debug/SomaDetection.obj
hackathon/ChenMY/SomaDetection/Debug/SomaDetection.pch
hackathon/ChenMY/SomaDetection/Debug/SomaDetection.tlog/CL.command.1.tlog
hackathon/ChenMY/SomaDetection/Debug/SomaDetection.tlog/CL.read.1.tlog
hackathon/ChenMY/SomaDetection/Debug/SomaDetection.tlog/CL.write.1.tlog
hackathon/ChenMY/SomaDetection/Debug/SomaDetection.tlog/link.command.1.tlog
hackathon/ChenMY/SomaDetection/Debug/SomaDetection.tlog/link.read.1.tlog
hackathon/ChenMY/SomaDetection/Debug/SomaDetection.tlog/link.write.1.tlog
hackathon/ChenMY/SomaDetection/Debug/SomaDetection.tlog/SomaDetection.lastbuildstate
hackathon/ChenMY/SomaDetection/Debug/vc141.idb
hackathon/ChenMY/SomaDetection/Debug/vc141.pdb
hackathon/ChenMY/SomaDetection/head.h
hackathon/ChenMY/SomaDetection/SomaDetection.vcxproj
hackathon/ChenMY/SomaDetection/SomaDetection.vcxproj.filters
hackathon/ChenMY/SomaDetection/SomaDetection.vcxproj.user
hackathon/ChenMY/SomaDetection/somaDetection_plugin.cpp