Apple M1 install instructions #1498
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adamgayoso
commented
Apr 8, 2022
Codecov Report
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## master #1498 +/- ##
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justjhong
reviewed
Apr 8, 2022
docs/installation.md
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| @@ -25,6 +25,10 @@ scvi-tools can be installed via conda or pip. If you don't know which to choose, | |||
| 1. Install [Python], we prefer the [pyenv](https:/pyenv/pyenv/) version management system, along with [pyenv-virtualenv](https:/pyenv/pyenv-virtualenv/). | |||
| 2. Install [PyTorch]. If you have an Nvidia GPU, be sure to install a version of PyTorch that supports it -- scvi-tools runs much faster with a discrete GPU. | |||
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| :::{note} | |||
| Installing scvi-tools on a Mac with Apple Silicon is only possible using a native version of Python and Python >=3.9. A native version of Python can be installed with an Apple Silicon version of miniconda (which can be installed from a native version of homebrew). This is due to an scvi-tools dependency on jax, which cannot be run via Rosetta. | |||
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native version of Python >=3.9?
justjhong
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Apr 8, 2022
nrclaudio
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to nrclaudio/scvi-tools-tune
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Jun 21, 2022
* Update installation.md * Update installation.md * Update docs/installation.md * Update installation.md Co-authored-by: Justin Hong <[email protected]>
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