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Resolves #3 adding gene expr correlation with str length in crc support + docker-compose + alembic migrations (optional) #4

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merged 1 commit into from
Oct 2, 2023

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slmjy
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@slmjy slmjy commented Sep 24, 2023

Resolves #3
Adds new CRCExprRepeatLenCorr model
Adds alembic migrations to the code base (turned off for now, but working)
Adds a script to insert data for CRCExprRepeatLenCorr from csv
Adds crc_expr_repeatlen_corr API method to retrieve the data

@merenlin

Dockerfile Outdated
@@ -1,18 +1,36 @@
FROM python:3.8-slim-buster
FROM postgres:13 as db
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remove this layer it is not used

@slmjy slmjy force-pushed the 3_crc_expr_repeatlen_corr branch 6 times, most recently from 4441374 to da355e0 Compare September 30, 2023 13:59
…rc support + docker-compose + alembic migrations (optional)
@merenlin merenlin merged commit 2b232b0 into acg-team:main Oct 2, 2023
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Add support for data on correlation between gene expression and str length in crc patients
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