Skip to content

This is prototype R code for identifying a core structure given the structures in a hit list.

License

Notifications You must be signed in to change notification settings

asm3-nist/HitList_CoreFinder

Folders and files

NameName
Last commit message
Last commit date

Latest commit

 

History

6 Commits
 
 
 
 
 
 
 
 
 
 

Repository files navigation

Prototype code for identifying "core" structure from a ms library search hit list.

Developers: 	Edward P. Erisman; [email protected]
	   	Arun S. Moorthy; [email protected]

Date: June 15th, 2022.
===================================================================================

Quick Start:

1. Open main.R in a text editor (or IDE). 
2. Confirm the external libraries specified on lines 17-20 are installed in your version of R. 
3. If external packages are installed, edit lines 23-34 to your requirements.
4. Run "main.R" in your R console (R, Rstudio, etc.)


External Packages Details.

For most external packages, they can be installed using a command as follows:

          install.packages("package.name")

and loaded using the command:

          library(package.name)


To install chemmineR and fmcs package (if not already installed), use the following commands:

 if (!requireNamespace("BiocManager", quietly=TRUE))
     install.packages("BiocManager")
 BiocManager::install("ChemmineR")
 
 if (!requireNamespace("BiocManager", quietly=TRUE))
    install.packages("BiocManager")
 BiocManager::install("fmcsR") 



 

About

This is prototype R code for identifying a core structure given the structures in a hit list.

Resources

License

Stars

Watchers

Forks

Releases

No releases published

Packages

No packages published

Languages