feat(client-omics): Support UBAM filetype for Omics Storage and make …

…referenceArn optional
aws · Nov 9, 2023 · b7ab1da · b7ab1da
1 parent 8630876
commit b7ab1da
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Showing 4 changed files with 22 additions and 9 deletions.
diff --git a/clients/client-omics/src/commands/CreateMultipartReadSetUploadCommand.ts b/clients/client-omics/src/commands/CreateMultipartReadSetUploadCommand.ts
@@ -58,7 +58,7 @@ export interface CreateMultipartReadSetUploadCommandOutput
  * subjectId: "STRING_VALUE", // required
  * sampleId: "STRING_VALUE", // required
  * generatedFrom: "STRING_VALUE",
- * referenceArn: "STRING_VALUE", // required
+ * referenceArn: "STRING_VALUE",
  * name: "STRING_VALUE", // required
  * description: "STRING_VALUE",
  * tags: { // TagMap

diff --git a/clients/client-omics/src/commands/StartReadSetImportJobCommand.ts b/clients/client-omics/src/commands/StartReadSetImportJobCommand.ts
@@ -58,7 +58,7 @@ export interface StartReadSetImportJobCommandOutput extends StartReadSetImportJo
  * subjectId: "STRING_VALUE", // required
  * sampleId: "STRING_VALUE", // required
  * generatedFrom: "STRING_VALUE",
- * referenceArn: "STRING_VALUE", // required
+ * referenceArn: "STRING_VALUE",
  * name: "STRING_VALUE",
  * description: "STRING_VALUE",
  * tags: { // TagMap

diff --git a/clients/client-omics/src/models/models_0.ts b/clients/client-omics/src/models/models_0.ts
@@ -2524,6 +2524,7 @@ export const FileType = {
  BAM: "BAM",
  CRAM: "CRAM",
  FASTQ: "FASTQ",
+ UBAM: "UBAM",
 } as const;
 
 /**
@@ -2589,7 +2590,7 @@ export interface CreateMultipartReadSetUploadRequest {
  * The ARN of the reference.
  * </p>
  */
- referenceArn: string | undefined;
+ referenceArn?: string;
 
  /**
  * @public
@@ -8027,7 +8028,7 @@ export interface StartReadSetImportJobSourceItem {
  * @public
  * <p>The source's reference ARN.</p>
  */
- referenceArn: string | undefined;
+ referenceArn?: string;
 
  /**
  * @public

diff --git a/codegen/sdk-codegen/aws-models/omics.json b/codegen/sdk-codegen/aws-models/omics.json
@@ -1620,8 +1620,7 @@
  "referenceArn": {
  "target": "com.amazonaws.omics#ReferenceArn",
  "traits": {
- "smithy.api#documentation": "<p>\n The ARN of the reference.\n </p>",
- "smithy.api#required": {}
+ "smithy.api#documentation": "<p>\n The ARN of the reference.\n </p>"
  }
  },
  "name": {
@@ -3559,6 +3558,10 @@
  {
  "value": "CRAM",
  "name": "CRAM"
+ },
+ {
+ "value": "UBAM",
+ "name": "UBAM"
  }
  ]
  }
@@ -11443,7 +11446,7 @@
  }
  },
  "referenceArn": {
- "target": "com.amazonaws.omics#ReferenceArn",
+ "target": "com.amazonaws.omics#ReferenceArnFilter",
  "traits": {
  "smithy.api#documentation": "<p>A genome reference ARN to filter on.</p>"
  }
@@ -11899,6 +11902,16 @@
  "smithy.api#pattern": "^arn:.+$"
  }
  },
+ "com.amazonaws.omics#ReferenceArnFilter": {
+ "type": "string",
+ "traits": {
+ "smithy.api#length": {
+ "min": 0,
+ "max": 127
+ },
+ "smithy.api#pattern": "^$|^arn:.+$"
+ }
+ },
  "com.amazonaws.omics#ReferenceDescription": {
  "type": "string",
  "traits": {
@@ -14122,8 +14135,7 @@
  "referenceArn": {
  "target": "com.amazonaws.omics#ReferenceArn",
  "traits": {
- "smithy.api#documentation": "<p>The source's reference ARN.</p>",
- "smithy.api#required": {}
+ "smithy.api#documentation": "<p>The source's reference ARN.</p>"
  }
  },
  "name": {