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Optimize cell detection #398

Merged
merged 18 commits into from
Apr 25, 2024

Merge branch 'main' of github.com:matham/cellfinder into numba_optim_…

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Merged

Optimize cell detection #398

Merge branch 'main' of github.com:matham/cellfinder into numba_optim_…
fb7b1b9
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Codecov / codecov/patch failed Apr 22, 2024 in 1s

81.15% of diff hit (target 89.29%)

View this Pull Request on Codecov

81.15% of diff hit (target 89.29%)

Annotations

Check warning on line 246 in cellfinder/core/detect/filters/volume/ball_filter.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

cellfinder/core/detect/filters/volume/ball_filter.py#L246 

Added line #L246 was not covered by tests

Check warning on line 76 in cellfinder/core/detect/filters/volume/structure_detection.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

cellfinder/core/detect/filters/volume/structure_detection.py#L70-L76 

Added lines #L70 - L76 were not covered by tests

Check warning on line 245 in cellfinder/core/detect/filters/volume/structure_detection.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

cellfinder/core/detect/filters/volume/structure_detection.py#L244-L245 

Added lines #L244 - L245 were not covered by tests

Check warning on line 247 in cellfinder/core/detect/filters/volume/structure_detection.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

cellfinder/core/detect/filters/volume/structure_detection.py#L247 

Added line #L247 was not covered by tests

Check warning on line 255 in cellfinder/core/detect/filters/volume/structure_detection.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

cellfinder/core/detect/filters/volume/structure_detection.py#L254-L255 

Added lines #L254 - L255 were not covered by tests

Check warning on line 260 in cellfinder/core/detect/filters/volume/structure_detection.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

cellfinder/core/detect/filters/volume/structure_detection.py#L257-L260 

Added lines #L257 - L260 were not covered by tests

Check warning on line 333 in cellfinder/core/detect/filters/volume/structure_detection.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

cellfinder/core/detect/filters/volume/structure_detection.py#L333 

Added line #L333 was not covered by tests

Check warning on line 335 in cellfinder/core/detect/filters/volume/structure_detection.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

cellfinder/core/detect/filters/volume/structure_detection.py#L335 

Added line #L335 was not covered by tests

Check warning on line 74 in cellfinder/core/detect/filters/volume/structure_splitting.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

cellfinder/core/detect/filters/volume/structure_splitting.py#L74 

Added line #L74 was not covered by tests

Check warning on line 165 in cellfinder/core/detect/filters/volume/volume_filter.py

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@codecov codecov / codecov/patch

cellfinder/core/detect/filters/volume/volume_filter.py#L165 

Added line #L165 was not covered by tests

Check warning on line 198 in cellfinder/core/detect/filters/volume/volume_filter.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

cellfinder/core/detect/filters/volume/volume_filter.py#L194-L198 

Added lines #L194 - L198 were not covered by tests
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