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Releases: cytomining/cytominer-database

v0.3.5

10 Oct 20:37
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Compatibility release for newer Python versions which may not be compatible with backports.tempfile.

Please note: This package is deprecated and will no longer be supported. Please use at your own risk!

What's Changed

Full Changelog: v0.3.4...v0.3.5

0.3.4

23 Jun 00:48
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Fixes a critical bug that prevents SQLite creation with large numbers of files.

0.3.3: Bumping version to stay in sync with Test PyPi

05 Dec 14:50
3b89692
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Release Notes

  • Identical to v0.3.1. The version was bumped to stay in sync with Test PyPi, to which we had pushed newer version to fix a bug that never was.

0.3.1: Fixed ingestion bug

05 Dec 13:50
3b89692
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Release Notes

  • Fixed bug that was resulting in the creation of one file per compartment #115 (introduced in 0.3.0 after the migration to sqlalchemy and pandas.read_sql)

Remove Deprecated Packages

15 Jul 21:11
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Release Notes

  • Remove odo and networkx dependencies e1c40e9
    • Now using sqlalchemy and pandas.read_sql
  • Update fixture calling in pytest b4dc573
  • No longer building on apveyor 9912c20
  • Replacing hashlib with zlib to create unique file labels 67cf2e3
  • Adding tests for missing values in sqlite files e5841a0
  • Remove Gemnasium link in README 60e8ac7
  • Updating maintainers 9abeabd
  • Minor documentation and code style updates

v0.2.0: Merge pull request #98 from cytomining/cells2numbers-patch-1

05 Mar 18:18
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  • updated documentation
  • added support to collect/ingest data even if only image CSVs are present

0.1.0

08 Jan 14:29
9a6b198
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#86 Adds the option to skip the Image_ header prefix in the image table. This is the new default behavior. Excluding or including the Image_ header prefix can be configured on the command line with --skip-image-prefix / --no-skip-image-prefix.

0.0.1

30 Nov 19:18
b025aee
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Release of 0.0.1

  • Added Windows support (in addition to OS X, Linux)
  • Multilevel commands under the cytominer-database namespace
  • Bug fixes
  • Use Python default warning levels
  • Supply a default configuration file
  • Improvements to package development, testing, and deployment including:
    • Enable PyPI deployment on Travis
    • Publishing universal wheels
    • CI for Python 2.7 and 3.6 on Linux and Windows
    • Automated builds on readthedocs

In compliance with PyPI, @shntnu is listed as the primary package author. Other authors and contributors are referenced in the contributors document.

0.0.1b5

23 Oct 18:26
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Fifth beta release of 0.0.1

  • Added Windows support (in addition to OS X, Linux)
  • Multilevel commands under the cytominer-database namespace
  • Bug fixes
  • Use Python default warning levels
  • Supply a default configuration file
  • Improvements to package development, testing, and deployment including:
    • Enable PyPI deployment on Travis
    • Publishing universal wheels
    • CI for Python 2.7 and 3.6 on Linux and Windows
    • Automated builds on readthedocs

In compliance with PyPI, @shntnu is listed as the primary package author. Other authors and contributors are referenced in the contributors document.

0.0.1b3

02 Oct 13:41
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Third beta release of 0.0.1

  • Added Windows support (in addition to OS X, Linux)
  • Multilevel commands under the cytominer-database namespace
  • Bug fixes
  • Improvements to package development, testing, and deployment including:
    • Enable PyPI deployment on Travis
    • Publishing universal wheels
    • CI for Python 2.7 and 3.6 on Linux and Windows
    • Automated builds on readthedocs

In compliance with PyPI, @shntnu has become the primary package author. Other authors and contributors are referenced in a contributors document.