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Expose sort option in picard FastqToSam task #397

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merged 1 commit into from
Jul 22, 2021

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mjhipp
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@mjhipp mjhipp commented Jul 22, 2021

Sorting can add a lot of time, I would like to be able to turn it off in some cases.

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Merging #397 (1feb26c) into master (58065bf) will not change coverage.
The diff coverage is n/a.

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@@           Coverage Diff           @@
##           master     #397   +/-   ##
=======================================
  Coverage   91.40%   91.40%           
=======================================
  Files          31       31           
  Lines        1187     1187           
  Branches       83       83           
=======================================
  Hits         1085     1085           
  Misses        102      102           
Flag Coverage Δ
unittests 91.40% <ø> (ø)

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@nh13 nh13 merged commit f639abd into fulcrumgenomics:master Jul 22, 2021
@mjhipp mjhipp deleted the mh_fastq_to_sam_sort branch July 22, 2021 21:34
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3 participants