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gorule-0000001.md

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layout id title type fail_mode status contact implementations
rule
GORULE:0000001
GAF lines are parsed according to GAF 2.2 specifications
filter
hard
implemented

Each line of a GAF file is checked that it generally conforms to the GAF 2.2 spec and some GO specific specifications. The GAF 2.2 spec is here: http://geneontology.org/docs/go-annotation-file-gaf-format-2.2/.

Qualifier, evidence, aspect and DB object columns must be within the list of allowed values (as per the spec).

Error report (number of errors) in [db_species]-summary.txt & owltools-check.txt (details).