Conda build and upload

.github/workflows/build.yaml

@@ -35,10 +35,10 @@ jobs:
  runs-on: ubuntu-latest
  steps:
  - uses: actions/checkout@v3
- - name: Set up Python 3.8
+ - name: Set up Python 3.9
  uses: actions/setup-python@v4
  with:
- python-version: 3.8
+ python-version: '3.9'
  - name: Install pypa/build
  run: python -m pip install build --user
  - name: Build a binary wheel and a source tarball
@@ -48,32 +48,35 @@ jobs:
  with:
  password: ${{ secrets.PYPI_API_TOKEN }}
 
- aur-release:
+ pypi-public:
  needs: pypi-release
+ - name: Get version number
+ run: |
+ VERSION="$(grep ':Version:' README.rst | awk '{print $2}')"
+ echo "DIST_VERSION=v${VERSION}" >> $GITHUB_ENV
+ - name: Wait for PyPi
+ uses: nev7n/wait_for_response@v1
+ with:
+ url: "https://files.pythonhosted.org/packages/source/l/lsbi/lsbi-${{ env.DIST_VERSION }}.tar.gz"
+ responseCode: 200
+ timeout: 600000
+ interval: 10000
+
+ aur-release:
+ needs: pypi-public
  runs-on: ubuntu-latest
  steps:
  - uses: actions/checkout@v3
- - name: Set up Python 3.8
+ - name: Set up Python 3.9
  uses: actions/setup-python@v4
  with:
- python-version: 3.8
+ python-version: '3.9'
  - name: Install dependencies
  run: |
  python -m pip install --upgrade pip
  python -m pip install tomli
  - name: Generate PKGBUILD
  run: python ./bin/gen_PKGBUILD.py > ./PKGBUILD
- - name: Get version number
- run: |
- VERSION="$(cat ./PKGBUILD | grep pkgver= | awk -F= '{print $2}')"
- echo "DIST_VERSION=${VERSION}" >> $GITHUB_ENV
- - name: Wait for PyPi
- uses: nev7n/wait_for_response@v1
- with:
- url: "https://files.pythonhosted.org/packages/source/l/lsbi/lsbi-${{ env.DIST_VERSION }}.tar.gz"
- responseCode: 200
- timeout: 600000
- interval: 10000
  - name: Publish AUR package
  uses: KSXGitHub/[email protected]
  with:
@@ -83,3 +86,31 @@ jobs:
  commit_username: ${{ secrets.AUR_USERNAME }}
  commit_email: ${{ secrets.AUR_EMAIL }}
  ssh_private_key: ${{ secrets.AUR_SSH_PRIVATE_KEY }}
+
+ conda-release:
+ needs: pypi-public
+ name: Build and deploy to conda
+ runs-on: ubuntu-latest
+ steps:
+ - uses: actions/checkout@v4
+ - name: Conda environment creation and activation
+ uses: conda-incubator/setup-miniconda@v2
+ with:
+ python-version: '3.9'
+ auto-update-conda: false
+ auto-activate-base: false
+ show-channel-urls: true
+ - name: install dependencies
+ shell: bash -el {0}
+ run: conda install grayskull conda-build anaconda-client
+ - name: Generate meta.yaml from grayskull
+ shell: bash -el {0}
+ run: grayskull pypi --strict-conda-forge lsbi
+ - name: Build and upload the conda packages
+ uses: uibcdf/[email protected]
+ with:
+ meta_yaml_dir: lsbi
+ python-version: '3.9'
+ user: handley-lab
+ label: 'main'
+ token: ${{ secrets.ANACONDA_TOKEN }} # Replace with the right name of your secret

.github/workflows/pr_checks.yaml

@@ -8,8 +8,11 @@ jobs:
  version-is-unit-incremented:
  runs-on: ubuntu-latest
  steps:
- - uses: actions/checkout@v3
+ - uses: actions/checkout@v4
  - uses: actions/setup-python@v4
+ with:
+ python-version: '3.9'
+ cache: 'pip'
  - name: Upgrade pip and install linters
  run: |
  python -m pip install --upgrade pip
@@ -33,7 +36,8 @@ jobs:
  make clean
  make html SPHINXOPTS="-W --keep-going -n"
 
- test-build-n-publish:
+ test-pypi-release:
+ name: Build and deploy to test PyPI
  runs-on: ubuntu-latest
  steps:
  - uses: actions/checkout@v4

README.rst

@@ -3,7 +3,7 @@ lsbi: Linear Simulation Based Inference
 =======================================
 :lsbi: Linear Simulation Based Inference
 :Author: Will Handley & David Yallup
-:Version: 0.9.0
+:Version: 0.9.1
 :Homepage: https:/handley-lab/lsbi
 :Documentation: http://lsbi.readthedocs.io/
 

lsbi/_version.py

@@ -1 +1 @@
-__version__ = "0.9.0"
+__version__ = "0.9.1"