how to obtain the visium_mouse_cortex_annotated_full.RData in the Spatial vignette?

[pcantalupo]

Hello, How can I get a copy of the RData that you use in the Spatial vignette?

https:/jinworks/CellChat/blob/main/tutorial/CellChat_analysis_of_spatial_transcriptomics_data.Rmd#L68

[sqjin]

@pcantalupo Please check https://figshare.com/projects/Example_data_for_cell-cell_communication_analysis_using_CellChat/157272

[pcantalupo]

Thank you

Two more things

1. The RData on Figshare is called visium_mouse_cortex_annotated.RData not the "full" RData (visium_mouse_cortex_annotated_full.RData) as specified in your code. Is it the same one and will it work in the CellChat_analysis_of_spatial_transcriptomics_data.Rmd R markdown file?
2. How do I get the JSON file? I could find it on FigShare. Here is your code file.path("/Users/suoqinjin/Library/CloudStorage/OneDrive-Personal/works/CellChat/tutorial/spatial_imaging_data_visium-brain", 'scalefactors_json.json'))

If possible, please provide reproducible links to these datasets in your code.

Thank you