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Feat: Multiprocessing for calling peaks (1 process per chromosome)
Feature Request
#665
opened Oct 9, 2024 by
jeanmonet
Q: What parameters should I need to tweak for viral ChipSeq
General Question
#656
opened Sep 2, 2024 by
Rohit-Satyam
Better cutoff levels control for bdgcallpeak cutoff-analysis
Feature Request
#654
opened Jul 22, 2024 by
callum-b
Q: using macs3 to detect peaks on long-read readings
General Question
#652
opened Jul 2, 2024 by
MJoseMo
Feat: Add --call-summits option in MACS3 bdgpeakcall?
Feature Request
#651
opened Jun 26, 2024 by
alicewang19
Q: How to use HMMRATAC to give us a narrow peak file and have signalValue, p and q-value ?
General Question
#648
opened Jun 13, 2024 by
MinaMyr
Setting cut-off when using logFE bigWig files from bdgcmp
General Question
#646
opened May 29, 2024 by
manjumoorthy95
Bug: Callvar throws an error when run on broadPeak file
Bug Report
#643
opened May 2, 2024 by
LinearParadox
Q: how to use MACS3 for ATAC seq with "himmratac" option?
General Question
#639
opened Apr 20, 2024 by
kbarrr
Q: HMMRATAC output and options for _summit.bed
General Question
#633
opened Mar 6, 2024 by
kawairine
Feat: Enhanced clarification of the specific definition of BEDPE as used by MACS
Feature Request
#626
opened Feb 24, 2024 by
kalavattam
Q: conversion of output files to UCSC track hub format?
General Question
#621
opened Feb 21, 2024 by
maximilianh
Q: Defining the bin size when generating bedgraphs.
General Question
#614
opened Jan 18, 2024 by
rikrdo89
Q: Is there a way to specify blacklisted regions in MACS2?
General Question
#613
opened Jan 18, 2024 by
rikrdo89
Mention alternative installation methods in install guide
Feature Request
#610
opened Jan 10, 2024 by
outpaddling
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