MetAMOS v1.5rc3 "Praline Brownie"

NEWS

1. Fix matplotlib check in INSTALL.py
2. Update IDBA-UD parameters
3. Support read length as a new parameter for generic programs
4. Updated Kraken release
5. Fix EA-UTILS filtering in preprocess
6. Fix Statistics::Descriptive installation
7. Disable k-mer genie for metagenomes
8. Allow assembly to be disabled in isolate mode with -a none.

DOCS

For MetAMOS user guide please see:

http://metamos.readthedocs.org/en/latest/

or:

https://media.readthedocs.org/pdf/metamos/latest/metamos.pdf

MetAMOS v1.5rc2 "Praline Brownie"

Last updated: April 18th, 2014

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We are happy to announce version 1.5rc2, a.k.a. Praline Brownie

NEWS

1. SRA download now working within frozen binary
2. kmergenie bug fixed within frozen binary
3. SPAdes bug fixed within frozen binary
4. file warning messages removed within frozen binary
5. OutputScaffold AMOS bug fixed and AMOS binaries updated
6. MapReads & Assemble plots now display correctly in Chrome
7. Fix rounding error when tiebreaking a winning assembly
8. Allow pre-assembled contigs with dots in file name
9. Enable stacktrace in verbose mode
10. Add echo as a supported command in the generics workflow
11. Fix phylosift installation
12. Fix jellyfish installation

Praline Brownie

We are happy to announce version 1.5rc1, a.k.a. Praline Brownie

NEWS

   1. iMetAMOS now available.
   2. Updated 64-bit frozen Linux binary now available (fixed FastQC issue)
   3. 64-bit Darwin (OSX) binary available
   4. Generic framework for adding assemblers/classifiers
   5. SRA run identifiers supported.
   6. Remote input files, as well as compressed input files are supported.
   7. Numerous bug fixes