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Include hmm file for ubcg #25

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iimog opened this issue Jan 19, 2018 · 0 comments
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Include hmm file for ubcg #25

iimog opened this issue Jan 19, 2018 · 0 comments
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@iimog
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iimog commented Jan 19, 2018

UBCG is a tool with very similar functionality. It uses a set of 91 genes. As all of those have corresponding TIGRFAM IDs it should be possible to provide an ubcg.hmm file in the data directory to use as an alternative of the default essential.hmm
It can be selected by setting the --hmmfile option accordingly.
Results of bcgTree and UBCG are then better comparable.

@iimog iimog self-assigned this Jan 19, 2018
@iimog iimog closed this as completed in 53665b0 Jul 19, 2018
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