QC check for x-refs

[katiermullen]

Could you please create a QC check (if it does not exist) to make sure that anytime there is a MONDO:preferredExternal that the x-ref also has the annotation MONDO:equivalentTo.

An example where I did not follow this rule is MONDO:1011429, the x-ref to OMIA:000605 should have the annotation MONDO:equivalentTo.

Note: the QC check should ensure that if an x-ref has a MONDO:relatedTo annotation it does not have a MONDO:preferredExternal annotation.

Finally, could you please add OMIA to the list of x-refs to QC: src/sparql/qc/general/qc-xref-without-source.sparql

Thank you!

---

Update from Trish:

• Create QC check to make sure that anytime there is an xref with source annotation MONDO:preferredExternal that there is also an xref source annotation of MONDO:equivalentTo
• Create QC check to make sure that anytime there is an xref with source annotation MONDO:relatedTo that it does not also have an xref source annotation of MONDO:preferredExternal
• Add OMIA to the list of x-refs to QC: "src/sparql/qc/general/qc-xref-without-source.sparql"

[matentzn]

@sabrinatoro the only way for me to do this is if it ends up on a 1:1 meeting with us and I can do it then and there

[twhetzel]

Let me know if you want to re-assign. I updated the description a bit in case that makes it more clear what the checks should be.

[matentzn]

Its done: #8012