Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

movie reader, tiff memmap, caiman memmap and pims #146

Merged
merged 2 commits into from
Dec 17, 2022

Conversation

kushalkolar
Copy link
Collaborator

tiff files are by default read as memmaps now using tifffile.memmap. caiman.get_input_movie() now takes an optional reader argument which can be a function that must return an array-like.

this is probably going to be our permanent input movie "loader", if users have their own file formats they just have to create a function that returns an array-like and pass it to caiman.get_input_movie(reader=my_func) to use it.

the main purpose of this is visualization downstream

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

1 participant