movie reader, tiff memmap, caiman memmap and pims #146
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tiff files are by default read as memmaps now using
tifffile.memmap
.caiman.get_input_movie()
now takes an optionalreader
argument which can be a function that must return an array-like.this is probably going to be our permanent input movie "loader", if users have their own file formats they just have to create a function that returns an array-like and pass it to
caiman.get_input_movie(reader=my_func)
to use it.the main purpose of this is visualization downstream