Add brain segmentations on whole-spine dataset

[Nilser3]

Description

I am currently segmenting whole-spine dataset with samseg tool, and would like to add these masks to the git-annex.

Labels namming

sub-amuAL_T1w_label-brain_dseg.nii.gz

Related issues:

#6

[Nilser3]

Hi @mguaypaq
Could you give me W access to whole-spine dataset please

Thanks you

[mguaypaq]

@Nilser3 I just gave you write access.

[Nilser3]

Hi @CharlesPageot

Brain segmentations have been done!
are currently in my branch: nlm/brain-segmentation-synthseg

Issues

The subject sub-unfErssm001 has a cropped brain, so it could not be segmented (see image).

and subject sub-unfErssm021 has no T1w image, so it was not segmented.

[CharlesPageot]

Super! Thank you Nilser :)