Faster execution and other minor improvements #2175
Merged
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The main purpose of this PR was to use
isct_antsApplyTransfo
instead of SCT system call for warping each volume, resulting in faster execution. In a typical dataset, execution time goes from 4.5min to 2min. Fixes #2173. This change makes #602 less relevant, there we can consider that this PR Fixes #602.Other improvements include:
sct_warp_template
TODO: