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Addresses #2079 Merge 'choroid plexus cell' into 'choroid plexus epithelial cell' #2088

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Aug 15, 2023

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@ghost ghost commented Aug 4, 2023

Addresses #2079 Merge 'choroid plexus cell' into 'choroid plexus epithelial cell'
and updated subsets

@ghost ghost self-assigned this Aug 4, 2023
@ghost ghost added the merge label Aug 4, 2023
@ghost ghost linked an issue Aug 4, 2023 that may be closed by this pull request
@ghost ghost requested a review from aleixpuigb August 4, 2023 09:48
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ghost commented Aug 4, 2023

FYI @emquardokus, in this merge 'choroid plexus cell' was obsoleted and removed from the subset human_reference_atlas. 'choroid plexus epithelial cell' was added to the subset human_reference_atlas.

ran: sh run.sh make all_subsets -B
@ghost ghost requested a review from anitacaron August 4, 2023 10:18
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ghost commented Aug 4, 2023

CC @anitacaron, will you kindly take a look at the updated subset files?

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Concerning the merge and obsoletion, everything looks fine.
About the HRA subset, the label was manually added, and I can't see any HRA template to add terms automatically. Therefore I don't think updating the subsets was needed, but it shouldn't break anything. However, I will defer the review of the subsets to @anitacaron.

src/ontology/cl-edit.owl Outdated Show resolved Hide resolved
removed human_reference_atlas subset
@anitacaron anitacaron self-requested a review August 14, 2023 12:51
@anitacaron anitacaron self-requested a review August 14, 2023 13:00
bvarner-ebi added 2 commits August 15, 2023 15:18
This reverts commit 9dd63cc.
revert changes
@ghost ghost merged commit 180d04c into master Aug 15, 2023
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@ghost ghost deleted the 2079-merge-choroid_plexus_cell branch August 15, 2023 14:48
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[Merge] 'choroid plexus cell' into 'choroid plexus epithelial cell'
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