Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Addresses #2178 relabel and edit 'mammary alveolar cell' #2196

Merged
merged 4 commits into from
Oct 18, 2023

Conversation

aleixpuigb
Copy link
Collaborator

Fixes #2178 relabel and edit 'mammary alveolar cell'


AnnotationAssertion(Annotation(oboInOwl:hasDbXref "GOC:tfm") Annotation(oboInOwl:hasDbXref "PMID:19022771") obo:IAO_0000115 obo:CL_0002325 "The milk-producing cell of the alveolar unit that emerges during pregnancy.")
AnnotationAssertion(Annotation(oboInOwl:hasDbXref "GOC:tfm") Annotation(oboInOwl:hasDbXref "PMID:19022771") Annotation(oboInOwl:hasDbXref "PMID:28717367") Annotation(oboInOwl:hasDbXref "PMID:35091553") Annotation(oboInOwl:hasDbXref "PMID:35377806") Annotation(oboInOwl:hasDbXref "doi:10.1177/156482659601700404") obo:IAO_0000115 obo:CL_0002325 "A glandular epithelial cell that is part of a mammary gland alveolus and differentiates from luminal adaptive secretory precursor cells during lactogenesis I. Following secretory activation during lactogenesis II, a lactocyte is involved in the biosynthesis and/or concentration of milk oligosaccharides, lactose, micronutrients, fat, hormones, immunoglobulins, and cytokines, as well as their transport into the lumen of the lactating mammary gland.")
Copy link

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

  • Consider noting milk-production in the first sentence.
  • "... differentiates from luminal adaptive secretory precursor cells." Consider making cells singular.

@aleixpuigb aleixpuigb requested a review from a user October 18, 2023 13:35
Copy link

@ghost ghost left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Defer content review to SMEs already involved; otherwise, approving with comments below.

  • expected to find a relationship with this cell type to 'mammary stem cell'.
    From the dbxref for 'mammary stem cell':
    "These stem cells have a unique capacity for self-renewal as well as for generating the three lineages that comprise the lobulo-alveolar structure of the adult gland: myoepithelial cells forming the basal layer of ducts and alveoli, ductal epithelial cells lining the lumen of ducts, and alveolar epithelial cells synthesizing milk proteins"

  • A related article that may be of interest for adding additional subtypes:
    https://www.science.org/doi/10.1126/sciadv.abm6865

@aleixpuigb
Copy link
Collaborator Author

expected to find a relationship with this cell type to 'mammary stem cell'.

Thank you for your comment. I will ask the SME about it, but currently it is known that these cells differentiate from luminal adaptive secretory precursor cells. LASP might be currently what 20 years ago were thought to be mammary stem cells, since they proliferate and differentiate.

@aleixpuigb aleixpuigb merged commit ce7e043 into master Oct 18, 2023
1 check passed
@aleixpuigb aleixpuigb deleted the 2178_edit_mammary_alveolar_cell branch October 18, 2023 14:18
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Projects
None yet
Development

Successfully merging this pull request may close these issues.

[relabel+definition] CL:0002325 'mammary alveolar cell' to lactocyte and update class
1 participant