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RFC-5: Transformations and Coordinate systems #255

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Oct 8, 2024
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bd45021
wip: start of transforms RFC
bogovicj Jul 30, 2024
20a0d25
stage D2 + clean up author table
bogovicj Jul 30, 2024
ce42618
overview and background
bogovicj Jul 30, 2024
5c603a6
fixes to proposal section
bogovicj Jul 30, 2024
2723c7c
update tform rfc authors
bogovicj Aug 14, 2024
939cc2c
updates matrix/affine/rotation
bogovicj Aug 14, 2024
ebe3cd8
add abandoned ideas section. rm some TODOs
bogovicj Aug 14, 2024
e95eaf6
write "Drawbacks, risks, alternatives, and unknowns"
bogovicj Aug 14, 2024
d1a5367
request some specific feedback
bogovicj Aug 14, 2024
9cb6ae4
Update rfc/wip-tform/index.md
bogovicj Aug 28, 2024
6c42692
Update rfc/wip-tform/index.md
bogovicj Aug 28, 2024
df16040
Update rfc/wip-tform/index.md
bogovicj Aug 28, 2024
139264d
Update rfc/wip-tform/index.md
bogovicj Aug 28, 2024
9c66c3f
Update rfc/wip-tform/index.md
bogovicj Aug 28, 2024
3c3ff8e
Update rfc/wip-tform/index.md
bogovicj Aug 28, 2024
69b6f57
Update rfc/wip-tform/index.md
bogovicj Aug 28, 2024
dadff02
rephrase paragraph on discrete/continuous axes
bogovicj Aug 28, 2024
b1e0cc8
typo and other minor fixes
bogovicj Sep 20, 2024
77a7db7
fix affine matrix size, and other small fixes
bogovicj Sep 23, 2024
cae3490
clarify invertibility of sequence
bogovicj Sep 23, 2024
3659933
add @normanrz as endorser
bogovicj Sep 23, 2024
9c18d4d
fix spelling
bogovicj Sep 25, 2024
8368cae
flesh out coordinates + displacements description
bogovicj Sep 25, 2024
6a02c6a
RFC-5: assign number
joshmoore Oct 8, 2024
8037848
Merge remote-tracking branch 'origin/main' into tform-rfc
joshmoore Oct 8, 2024
7979256
Minor navigation improvements
joshmoore Oct 8, 2024
08d6a61
Update to long-form status table
joshmoore Oct 8, 2024
d3e3937
Remove reference to missing example 'above'
joshmoore Oct 8, 2024
3fb7ac1
Fix markdown for rendering of `` blocks
joshmoore Oct 8, 2024
b006360
Simplify deflist where possible
joshmoore Oct 8, 2024
63976bf
Fix stakeholders links
joshmoore Oct 8, 2024
4d33b87
Add changelog
joshmoore Oct 8, 2024
67a217a
Minor index/changelog adjustments
joshmoore Oct 8, 2024
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1 change: 1 addition & 0 deletions conf.py
Original file line number Diff line number Diff line change
Expand Up @@ -16,6 +16,7 @@
extensions = ["myst_parser"]
source_suffix = [".rst", ".md"]
myst_heading_anchors = 5
myst_enable_extensions = ["deflist"]

templates_path = ['_templates']
exclude_patterns = ['_build', 'Thumbs.db', '.DS_Store', '.git', '.pytest_cache', '**/.pytest_cache', '**/.tox', 'README.md', 'LICENSE.md', 'CONTRIBUTING.md']
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2 changes: 1 addition & 1 deletion rfc/1/versions/index.md
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@@ -1,6 +1,6 @@
# Versions

Key versions of the RFC which have been sent for review, etc.
Key versions of RFC-1 which have been sent for review, etc.

```{toctree}
:maxdepth: 1
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2 changes: 1 addition & 1 deletion rfc/2/versions/index.md
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@@ -1,6 +1,6 @@
# Versions

Key versions of the RFC which have been sent for review, etc.
Key versions of RFC-2 which have been sent for review, etc.

```{toctree}
:maxdepth: 1
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1 change: 0 additions & 1 deletion rfc/4/index.md
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Expand Up @@ -3,7 +3,6 @@
```{toctree}
:hidden:
:maxdepth: 1
templates/index
reviews/index
comments/index
responses/index
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2 changes: 1 addition & 1 deletion rfc/4/versions/index.md
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
# Versions

Key versions of the RFC which have been sent for review, etc.
Key versions of RFC-4 which have been sent for review, etc.

```{toctree}
:maxdepth: 1
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9 changes: 9 additions & 0 deletions rfc/5/comments/index.md
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@@ -0,0 +1,9 @@
# Comments

Additional comments of RFC-5:

```{toctree}
:maxdepth: 1
:glob:
*/index
```
722 changes: 722 additions & 0 deletions rfc/5/index.md

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9 changes: 9 additions & 0 deletions rfc/5/responses/index.md
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# Responses

Responses from the authors of RFC-5:

```{toctree}
:maxdepth: 1
:glob:
*/index
```
9 changes: 9 additions & 0 deletions rfc/5/reviews/index.md
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@@ -0,0 +1,9 @@
# Reviews

Reviews of RFC-5:

```{toctree}
:maxdepth: 1
:glob:
*/index
```
9 changes: 9 additions & 0 deletions rfc/5/versions/index.md
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@@ -0,0 +1,9 @@
# Versions

Key versions of RFC-5 which have been sent for review, etc.

```{toctree}
:maxdepth: 1
:glob:
*/index
```
4 changes: 3 additions & 1 deletion rfc/listing.csv
Original file line number Diff line number Diff line change
Expand Up @@ -2,4 +2,6 @@ RFC,Description,Date,Status
[0](0/index.md),Original consensus model for decision making,2021,N/A
[1](1/index.md),RFC Process,2024,Under review
[2](2/index.md),Zarr V3 Support,2024,Accepted
[3](3/index.md),Axis Anatomical Orientation,Under review
3,Remove axis restrictions,2024, Clarifications
[4](4/index.md),Axis Anatomical Orientation,2024,Under review
[5](5/index.md),Coordinate systems and transformations,2024,Under review
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