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Add high-level positions getter, exclude virtual sites by default #3870

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Add high-level positions getter, exclude virtual sites by default

Add high-level positions getter, exclude virtual sites by default #3870

Test on ubuntu-latest, Python 3.11, OpenMM true, Pydantic 2, OpenEye true

Test on ubuntu-latest, Python 3.11, OpenMM true, Pydantic 2, OpenEye true
succeeded Oct 7, 2024 in 5m 57s