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functionality considerations #8

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arq5x opened this issue Jan 5, 2024 · 0 comments
Open

functionality considerations #8

arq5x opened this issue Jan 5, 2024 · 0 comments

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@arq5x
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arq5x commented Jan 5, 2024

Will add to this, but things that come to mind.

  • handling zero-length intervals for 0-based, half-open formats
  • handling intersections when considering (or not) split intervals (e.g., BED12 and BAM)
  • grouping intervals by name or other identifiers for things like merging. e.g., merge all exons from all isoforms of the same gene but ignore overlapping exons from other genes.
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