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SV filtering comments #68
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The problem with your first suggestion is that one has to parse through the whole file for this functionality, which would take some time if there are millions of variants. For the second thing we could try to implement it ands how it works. |
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Hej @moonso,
The new SV filters work nicely. Two quick thoughts:
For example, if only types DEL, INV and BND exist in my VCF - the other filter options should not be there.
This is important I think. Since you're only loading 31 variants at a time, it will be useful to know how many variants I've matched in my filter (vs the total available in the VCF)
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