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seung-lab

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  1. connected-components-3d connected-components-3d Public

    Connected components on discrete and continuous multilabel 3D & 2D images. Handles 26, 18, and 6 connected variants; periodic boundaries (4, 8, & 6)

    C++ 361 43

  2. euclidean-distance-transform-3d euclidean-distance-transform-3d Public

    Euclidean distance & signed distance transform for multi-label 3D anisotropic images using marching parabolas.

    C++ 238 37

  3. kimimaro kimimaro Public

    Skeletonize densely labeled 3D image segmentations with TEASAR. (Medial Axis Transform)

    C++ 136 23

  4. cloud-volume cloud-volume Public

    Read and write Neuroglancer datasets programmatically.

    Python 131 47

  5. znn-release znn-release Public archive

    Multi-core CPU implementation of deep learning for 2D and 3D sliding window convolutional networks (ConvNets).

    C++ 94 33

  6. DracoPy DracoPy Public

    Python wrapper for Google's Draco mesh compression library.

    C++ 85 25

Repositories

Showing 10 of 179 repositories
  • igneous Public

    Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.

    seung-lab/igneous’s past year of commit activity
    Python 44 GPL-3.0 17 18 3 Updated Oct 10, 2024
  • neuroglancer Public Forked from google/neuroglancer

    WebGL-based viewer for volumetric data

    seung-lab/neuroglancer’s past year of commit activity
    TypeScript 22 Apache-2.0 308 91 35 Updated Oct 10, 2024
  • zmesh Public

    Marching Cubes & Mesh Simplification on multi-label 3D images.

    seung-lab/zmesh’s past year of commit activity
    C++ 58 GPL-3.0 8 3 2 Updated Oct 10, 2024
  • connected-components-3d Public

    Connected components on discrete and continuous multilabel 3D & 2D images. Handles 26, 18, and 6 connected variants; periodic boundaries (4, 8, & 6)

    seung-lab/connected-components-3d’s past year of commit activity
    C++ 361 LGPL-3.0 43 9 4 Updated Oct 9, 2024
  • cloud-volume Public

    Read and write Neuroglancer datasets programmatically.

    seung-lab/cloud-volume’s past year of commit activity
    Python 131 BSD-3-Clause 47 77 5 Updated Oct 8, 2024
  • seuron Public Forked from wongwill86/air-tasks

    SEUnglab neuRON pipeline

    seung-lab/seuron’s past year of commit activity
    Python 5 MIT 6 1 0 Updated Sep 30, 2024
  • abiss Public

    Affinity based image segmentation system

    seung-lab/abiss’s past year of commit activity
    C++ 3 GPL-3.0 1 0 1 Updated Sep 30, 2024
  • tile-transcoder Public

    Transfer and convert the file format of image tiles.

    seung-lab/tile-transcoder’s past year of commit activity
    Python 2 BSD-3-Clause 0 0 0 Updated Sep 27, 2024
  • pyfqmr-Fast-Quadric-Mesh-Reduction Public Forked from Kramer84/pyfqmr-Fast-Quadric-Mesh-Reduction

    Mesh triangle reduction using quadrics

    seung-lab/pyfqmr-Fast-Quadric-Mesh-Reduction’s past year of commit activity
    C++ 0 MIT 13 0 0 Updated Sep 11, 2024
  • cloud-files Public

    Threaded Python and CLI client library for AWS S3, Google Cloud Storage (GCS), in-memory, and the local filesystem.

    seung-lab/cloud-files’s past year of commit activity
    Python 38 BSD-3-Clause 8 14 0 Updated Sep 10, 2024
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