Sample 313_C

[GenOnyx]

Hi,
I was trying to download the visium samples from the SPATAData package and observed that sample 313_C is incorrect. It looks like the link provided to download the 313_C object actually downloads the 304_T object. The command used is:

downloadSpataObjects(sample_names = c("313_C"), folder = "objects")
12:57:24 Downloading sample 313_C from 'https://www.dropbox.com/s/96a6p0muz47pwzd/304_T.RDS?dl=1'.
12:58:23 Updating spata2 object.
12:58:23 Adding default for argument 'min_lfc' = 0.
12:58:23 Adding default for argument 'pt_size_fixed' = TRUE.
12:58:23 Converting variable 'segmentation' to factor.
12:58:23 Done.
12:58:23 Default directory to the corresponding spata-object set to 'objects/313_C.RDS'.
12:58:23 Saving spata-object under 'objects/313_C.RDS'.
12:58:57 Done.
12:58:57 Successfully downloaded '313_C'.

Could you please update the link for the correct object?

[heilandd]

Thanks is done!

[wlwang20]

I am still experiencing this same issue with SPATAData_0.0.0.9000. Please advise on how to proceed!

[heilandd]

We will fix this, in the mean time, you can download all files in our repository: Datadryad https://doi.org/10.5061/dryad.h70rxwdmj
Best