Merge pull request #212 from trafficonese/develop

Update JS-dependencies

.Rbuildignore

@@ -3,21 +3,24 @@
 ^inst/examples/.*\.Rmd
 ^inst/examples/.*\.html
 ^inst/examples/rsconnect
+^inst/htmlwidgets/bindings
+^inst/htmlwidgets/src
 ^cran-comments\.md$
 ^README\.md$
 ^README\.Rmd$
-^\.travis\.yml$
-^appveyor\.yml$
-^\_pkgdown\.yaml$
 ^docs$
-^inst/examples/virginia.rds$
-^CONDUCT\.md$
+^CODE_OF_CONDUCT\.md$
 ^node_modules
 ^package.*\.json
 ^revdep
 ^viztest
+^private
 ^\.lintr$
 ^scripts
 ^webpack\.config\.js
-^inst/htmlwidgets/bindings
-^inst/htmlwidgets/src
+^.eslintrc\.js$
+^\.github$
+^\_pkgdown\.yaml$
+^_pkgdown\.yml$
+^pkgdown$
+^codecov\.yml$

.eslintrc.js

@@ -0,0 +1,40 @@
+module.exports = {
+ parserOptions: {
+ 'ecmaVersion': 6,
+ 'sourceType': 'module'
+ },
+ env: {
+ browser: true,
+ node: true,
+ },
+ extends: 'eslint:recommended',
+ plugins: [
+ '@stylistic/js'
+ ],
+ rules: {
+ 'indent': ['error', 2],
+ '@stylistic/js/array-bracket-spacing': ['error', 'never'],
+ '@stylistic/js/arrow-spacing': 'error',
+ '@stylistic/js/comma-spacing': ['error', { 'before': false, 'after': true }],
+ '@stylistic/js/comma-style': ['error', 'last'],
+ '@stylistic/js/multiline-ternary': ['error', 'always'],
+ '@stylistic/js/eol-last': ['error', 'always'],
+ '@stylistic/js/function-paren-newline': ['error', 'never'],
+ '@stylistic/js/space-infix-ops': 'error',
+ '@stylistic/js/key-spacing': ['error', { 'beforeColon': false, 'afterColon': true}],
+ '@stylistic/js/lines-around-comment': ['error', { 'beforeBlockComment': true }],
+ '@stylistic/js/function-call-spacing': ['error', 'never'],
+ '@stylistic/js/no-floating-decimal': 'error',
+ '@stylistic/js/no-multi-spaces': 'error',
+ '@stylistic/js/space-before-blocks': 'error',
+ '@stylistic/js/keyword-spacing': ['error', { 'before': true, 'after': true }],
+ 'linebreak-style': 'off',
+ 'quotes': ['error', 'single'],
+ 'semi': ['error', 'always'],
+ 'no-unused-vars': ['error', {'args': 'none'}],
+ 'no-console': ['error', { allow: ['warn', 'error'] }],
+ 'no-var': 'off',
+ 'prefer-const': 'error',
+ 'no-assign-const': 'off'
+ }
+};

.github/.gitignore

@@ -0,0 +1 @@
+*.html

.github/dependabot.yaml

@@ -0,0 +1,8 @@
+version: 2
+
+updates:
+ # Keep dependencies for GitHub Actions up-to-date
+ - package-ecosystem: "github-actions"
+ directory: "/"
+ schedule:
+ interval: "weekly"

.github/workflows/R-CMD-check.yaml

@@ -0,0 +1,51 @@
+# Workflow derived from https:/r-lib/actions/tree/v2/examples
+# Need help debugging build failures? Start at https:/r-lib/actions#where-to-find-help
+on:
+ push:
+ branches: [main, master, develop]
+ pull_request:
+ branches: [main, master, develop]
+
+name: R-CMD-check
+
+jobs:
+ R-CMD-check:
+ runs-on: ${{ matrix.config.os }}
+
+ name: ${{ matrix.config.os }} (${{ matrix.config.r }})
+
+ strategy:
+ fail-fast: false
+ matrix:
+ config:
+ - {os: macos-latest, r: 'release'}
+ - {os: windows-latest, r: 'release'}
+ - {os: ubuntu-latest, r: 'devel', http-user-agent: 'release'}
+ - {os: ubuntu-latest, r: 'release'}
+ - {os: ubuntu-latest, r: 'oldrel-1'}
+
+ env:
+ GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
+ R_KEEP_PKG_SOURCE: yes
+
+ steps:
+ - uses: actions/checkout@v4
+
+ - uses: r-lib/actions/setup-pandoc@v2
+
+ - uses: r-lib/actions/setup-r@v2
+ with:
+ r-version: ${{ matrix.config.r }}
+ http-user-agent: ${{ matrix.config.http-user-agent }}
+ use-public-rspm: true
+
+ - uses: r-lib/actions/setup-r-dependencies@v2
+ with:
+ extra-packages: any::rcmdcheck
+ needs: check
+
+ - uses: r-lib/actions/check-r-package@v2
+ with:
+ args: 'c("--no-manual", "--as-cran")'
+ upload-snapshots: true
+ build_args: 'c("--no-manual","--compact-vignettes=gs+qpdf")'

.github/workflows/npm_run.yaml

@@ -0,0 +1,25 @@
+# Workflow derived from https:/r-lib/actions/tree/v2/examples
+# Need help debugging build failures? Start at https:/r-lib/actions#where-to-find-help
+on:
+ push:
+ branches: [main, master, develop]
+ pull_request:
+ branches: [main, master, develop]
+
+name: Node.js CI
+
+jobs:
+ build:
+ runs-on: ubuntu-latest
+ strategy:
+ matrix:
+ node-version: [16.x, 18.x, 20.x]
+ steps:
+ - uses: actions/checkout@v4
+ - name: Use Node.js ${{ matrix.node-version }}
+ uses: actions/setup-node@v4
+ with:
+ node-version: ${{ matrix.node-version }}
+ - run: npm ci
+ - run: npx napa
+ - run: npm run build --if-present

.github/workflows/pkgdown.yaml

@@ -0,0 +1,48 @@
+# Workflow derived from https:/r-lib/actions/tree/v2/examples
+# Need help debugging build failures? Start at https:/r-lib/actions#where-to-find-help
+on:
+ push:
+ branches: [main, master]
+ pull_request:
+ branches: [main, master]
+ release:
+ types: [published]
+ workflow_dispatch:
+
+name: pkgdown
+
+jobs:
+ pkgdown:
+ runs-on: ubuntu-latest
+ # Only restrict concurrency for non-PR jobs
+ concurrency:
+ group: pkgdown-${{ github.event_name != 'pull_request' || github.run_id }}
+ env:
+ GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
+ permissions:
+ contents: write
+ steps:
+ - uses: actions/checkout@v4
+
+ - uses: r-lib/actions/setup-pandoc@v2
+
+ - uses: r-lib/actions/setup-r@v2
+ with:
+ use-public-rspm: true
+
+ - uses: r-lib/actions/setup-r-dependencies@v2
+ with:
+ extra-packages: any::pkgdown, local::.
+ needs: website
+
+ - name: Build site
+ run: pkgdown::build_site_github_pages(new_process = FALSE, install = FALSE)
+ shell: Rscript {0}
+
+ - name: Deploy to GitHub pages 🚀
+ if: github.event_name != 'pull_request'
+ uses: JamesIves/[email protected]
+ with:
+ clean: false
+ branch: gh-pages
+ folder: docs

.github/workflows/pr-commands.yaml

@@ -0,0 +1,79 @@
+# Workflow derived from https:/r-lib/actions/tree/v2/examples
+# Need help debugging build failures? Start at https:/r-lib/actions#where-to-find-help
+on:
+ issue_comment:
+ types: [created]
+
+name: Commands
+
+jobs:
+ document:
+ if: ${{ github.event.issue.pull_request && (github.event.comment.author_association == 'MEMBER' || github.event.comment.author_association == 'OWNER') && startsWith(github.event.comment.body, '/document') }}
+ name: document
+ runs-on: ubuntu-latest
+ env:
+ GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
+ steps:
+ - uses: actions/checkout@v4
+
+ - uses: r-lib/actions/pr-fetch@v2
+ with:
+ repo-token: ${{ secrets.GITHUB_TOKEN }}
+
+ - uses: r-lib/actions/setup-r@v2
+ with:
+ use-public-rspm: true
+
+ - uses: r-lib/actions/setup-r-dependencies@v2
+ with:
+ extra-packages: any::roxygen2
+ needs: pr-document
+
+ - name: Document
+ run: roxygen2::roxygenise()
+ shell: Rscript {0}
+
+ - name: commit
+ run: |
+ git config --local user.name "$GITHUB_ACTOR"
+ git config --local user.email "[email protected]"
+ git add man/\* NAMESPACE
+ git commit -m 'Document'
+
+ - uses: r-lib/actions/pr-push@v2
+ with:
+ repo-token: ${{ secrets.GITHUB_TOKEN }}
+
+ style:
+ if: ${{ github.event.issue.pull_request && (github.event.comment.author_association == 'MEMBER' || github.event.comment.author_association == 'OWNER') && startsWith(github.event.comment.body, '/style') }}
+ name: style
+ runs-on: ubuntu-latest
+ env:
+ GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
+ steps:
+ - uses: actions/checkout@v4
+
+ - uses: r-lib/actions/pr-fetch@v2
+ with:
+ repo-token: ${{ secrets.GITHUB_TOKEN }}
+
+ - uses: r-lib/actions/setup-r@v2
+
+ - name: Install dependencies
+ run: install.packages("styler")
+ shell: Rscript {0}
+
+ - name: Style
+ run: styler::style_pkg()
+ shell: Rscript {0}
+
+ - name: commit
+ run: |
+ git config --local user.name "$GITHUB_ACTOR"
+ git config --local user.email "[email protected]"
+ git add \*.R
+ git commit -m 'Style'
+
+ - uses: r-lib/actions/pr-push@v2
+ with:
+ repo-token: ${{ secrets.GITHUB_TOKEN }}

.github/workflows/styler.yaml

@@ -0,0 +1,77 @@
+# Workflow derived from https:/r-lib/actions/tree/v2/examples
+# Need help debugging build failures? Start at https:/r-lib/actions#where-to-find-help
+on:
+ push:
+ branches: [main, master, develop]
+ pull_request:
+ branches: [main, master, develop]
+
+name: Style
+
+jobs:
+ style:
+ runs-on: ubuntu-latest
+ permissions:
+ contents: write
+ env:
+ GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
+ steps:
+ - name: Checkout repo
+ uses: actions/checkout@v4
+ with:
+ fetch-depth: 0
+
+ - name: Setup R
+ uses: r-lib/actions/setup-r@v2
+ with:
+ use-public-rspm: true
+
+ - name: Install dependencies
+ uses: r-lib/actions/setup-r-dependencies@v2
+ with:
+ extra-packages: any::styler, any::roxygen2
+ needs: styler
+
+ - name: Enable styler cache
+ run: styler::cache_activate()
+ shell: Rscript {0}
+
+ - name: Determine cache location
+ id: styler-location
+ run: |
+ cat(
+ "location=",
+ styler::cache_info(format = "tabular")$location,
+ "\n",
+ file = Sys.getenv("GITHUB_OUTPUT"),
+ append = TRUE,
+ sep = ""
+ )
+ shell: Rscript {0}
+
+ - name: Cache styler
+ uses: actions/cache@v4
+ with:
+ path: ${{ steps.styler-location.outputs.location }}
+ key: ${{ runner.os }}-styler-${{ github.sha }}
+ restore-keys: |
+ ${{ runner.os }}-styler-
+ ${{ runner.os }}-
+
+ - name: Style
+ run: styler::style_pkg()
+ shell: Rscript {0}
+
+ - name: Commit and push changes
+ run: |
+ if FILES_TO_COMMIT=($(git diff-index --name-only ${{ github.sha }} \
+ | egrep --ignore-case '\.(R|[qR]md|Rmarkdown|Rnw|Rprofile)$'))
+ then
+ git config --local user.name "$GITHUB_ACTOR"
+ git config --local user.email "[email protected]"
+ git commit ${FILES_TO_COMMIT[*]} -m "Style code (GHA)"
+ git pull --ff-only
+ git push origin
+ else
+ echo "No changes to commit."
+ fi