Fix up project.xml path

ucam-department-of-psychiatry · Jul 22, 2024 · 3e3a40d · 3e3a40d
1 parent dffdba7
commit 3e3a40d
Showing 1 changed file with 4 additions and 4 deletions.
diff --git a/intermine_builder/build.sh b/intermine_builder/build.sh
@@ -115,12 +115,12 @@ if [ ! -f /home/intermine/intermine/${THE_MINE_NAME}/project.xml ]; then
  sed -i 's/'${IM_DATA_DIR:-DATA_DIR}'/\/home\/intermine\/intermine\/data/g' /home/intermine/intermine/${THE_MINE_NAME}/project.xml
  sed -i 's/dump="true"/dump="false"/g' /home/intermine/intermine/${THE_MINE_NAME}/project.xml
  else
- echo "$(date +%Y/%m/%d-%H:%M) Copy project.xml to ~/biotestmine/project.xml" #>> /home/intermine/intermine/build.progress
- cp /home/intermine/intermine/biotestmine/data/project.xml /home/intermine/intermine/biotestmine/
+ echo "$(date +%Y/%m/%d-%H:%M) Copy project.xml to ~/intermine/${THE_MINE_NAME}/project.xml" #>> /home/intermine/intermine/build.progress
+ cp /home/intermine/intermine/${THE_MINE_NAME}/data/project.xml /home/intermine/intermine/${THE_MINE_NAME}
 
  echo "$(date +%Y/%m/%d-%H:%M) Set correct source path in project.xml" #>> /home/intermine/intermine/build.progress
- sed -i 's/'${IM_DATA_DIR:-DATA_DIR}'/\/home\/intermine\/intermine\/data/g' /home/intermine/intermine/biotestmine/project.xml
- sed -i 's/dump="true"/dump="false"/g' /home/intermine/intermine/biotestmine/project.xml
+ sed -i 's/'${IM_DATA_DIR:-DATA_DIR}'/\/home\/intermine\/intermine\/data/g' /home/intermine/intermine/${THE_MINE_NAME}/project.xml
+ sed -i 's/dump="true"/dump="false"/g' /home/intermine/intermine/${THE_MINE_NAME}/project.xml
 
  fi
 else