Merge pull request #209 from zhanghao-njmu/develop

Increment version number to 0.5.6

DESCRIPTION

@@ -1,7 +1,7 @@
 Package: SCP
 Type: Package
 Title: Single Cell Pipeline
-Version: 0.5.5
+Version: 0.5.6
 Author: Hao Zhang
 Maintainer: Hao Zhang <[email protected]>
 Description: An end-to-end Single-Cell Pipeline designed to facilitate comprehensive analysis and exploration of single-cell data.

R/SCP-plot.R

@@ -1332,7 +1332,7 @@ CellDimPlot <- function(srt, group.by, reduction = NULL, dims = c(1, 2), split.b
  label_point_size = 1, label_point_color = "black", label_segment_color = "black",
  cells.highlight = NULL, cols.highlight = "black", sizes.highlight = 1, alpha.highlight = 1, stroke.highlight = 0.5,
  add_density = FALSE, density_color = "grey80", density_filled = FALSE, density_filled_palette = "Greys", density_filled_palcolor = NULL,
- add_mark = FALSE, mark_type = c("hull", "ellipse", "rect", "circle"), mark_expand = unit(3, "mm"), mark_alpha = 0.1, mark_linetype = 1,
+ add_mark = FALSE, mark_type = c("hull", "ellipse", "rect", "circle"), mark_expand = grid::unit(3, "mm"), mark_alpha = 0.1, mark_linetype = 1,
  lineages = NULL, lineages_trim = c(0.01, 0.99), lineages_span = 0.75,
  lineages_palette = "Dark2", lineages_palcolor = NULL, lineages_arrow = arrow(length = unit(0.1, "inches")),
  lineages_linewidth = 1, lineages_line_bg = "white", lineages_line_bg_stroke = 0.5,