New CLI Options #364

ments. # Please enter the commit message for your changes. Lines starting # with '#' will be ignored, and an empty message aborts the commit. # # interactive rebase in progress; onto 2fa8069 # Last commands done (3 commands done): # pick 7db1c77 Updates to pass pre-commit. # pick 9197e4e Bug fix and log statements. # Next commands to do (2 remaining commands): # pick f382208 Updatest to resolve conflicts with changes related to floating point headers for indexing. # pick 6961e1d Fix pre-commit linting. # You are currently rebasing branch 'main' on '2fa8069'. # # Changes to be committed: # modified: src/mdio/segy/utilities.py # modified: tests/integration/test_segy_import_export.py # # Untracked files: # .devcontainer_bck/Dockerfile # .devcontainer_bck/devcontainer.json # .devcontainer_bck/post-install.sh # .gitignore_bck # TEST.md # debugging/0__6372_PREPNODMLT.LIBRARY_2.mdio.jpg # debugging/6372_export.py # debugging/6372_ram_usage.csv # debugging/6372_ram_usage.csv_bck # debugging/Debug.md # debugging/None # debugging/docker_env/bin/Activate.ps1 # debugging/docker_env/bin/activate # debugging/docker_env/bin/activate.csh # debugging/docker_env/bin/activate.fish # debugging/docker_env/bin/dask # debugging/docker_env/bin/dask-scheduler # debugging/docker_env/bin/dask-ssh # debugging/docker_env/bin/dask-worker # debugging/docker_env/bin/doesitcache # debugging/docker_env/bin/dul-receive-pack # debugging/docker_env/bin/dul-upload-pack # debugging/docker_env/bin/dulwich # debugging/docker_env/bin/easy_install # debugging/docker_env/bin/easy_install-3.8 # debugging/docker_env/bin/f2py # debugging/docker_env/bin/f2py3 # debugging/docker_env/bin/f2py3.8 # debugging/docker_env/bin/fonttools # debugging/docker_env/bin/jsonschema # debugging/docker_env/bin/keyring # debugging/docker_env/bin/pip # debugging/docker_env/bin/pip3 # debugging/docker_env/bin/pip3.8 # debugging/docker_env/bin/pkginfo # debugging/docker_env/bin/poetry # debugging/docker_env/bin/py-spy # debugging/docker_env/bin/pyftmerge # debugging/docker_env/bin/pyftsubset # debugging/docker_env/bin/pyproject-build # debugging/docker_env/bin/python # debugging/docker_env/bin/python3 # debugging/docker_env/bin/ttx # debugging/docker_env/bin/virtualenv # debugging/docker_env/lib64 # debugging/docker_env/share/man/man1/ttx.1 # debugging/docker_env/share/python-wheels/CacheControl-0.12.6-py2.py3-none-any.whl # debugging/docker_env/share/python-wheels/appdirs-1.4.3-py2.py3-none-any.whl # debugging/docker_env/share/python-wheels/certifi-2019.11.28-py2.py3-none-any.whl # debugging/docker_env/share/python-wheels/chardet-3.0.4-py2.py3-none-any.whl # debugging/docker_env/share/python-wheels/colorama-0.4.3-py2.py3-none-any.whl # debugging/docker_env/share/python-wheels/contextlib2-0.6.0-py2.py3-none-any.whl # debugging/docker_env/share/python-wheels/distlib-0.3.0-py2.py3-none-any.whl # debugging/docker_env/share/python-wheels/distro-1.4.0-py2.py3-none-any.whl # debugging/docker_env/share/python-wheels/html5lib-1.0.1-py2.py3-none-any.whl # debugging/docker_env/share/python-wheels/idna-2.8-py2.py3-none-any.whl # debugging/docker_env/share/python-wheels/ipaddr-2.2.0-py2.py3-none-any.whl # debugging/docker_env/share/python-wheels/lockfile-0.12.2-py2.py3-none-any.whl # debugging/docker_env/share/python-wheels/msgpack-0.6.2-py2.py3-none-any.whl # debugging/docker_env/share/python-wheels/packaging-20.3-py2.py3-none-any.whl # debugging/docker_env/share/python-wheels/pep517-0.8.2-py2.py3-none-any.whl # debugging/docker_env/share/python-wheels/pip-20.0.2-py2.py3-none-any.whl # debugging/docker_env/share/python-wheels/pkg_resources-0.0.0-py2.py3-none-any.whl # debugging/docker_env/share/python-wheels/progress-1.5-py2.py3-none-any.whl # debugging/docker_env/share/python-wheels/pyparsing-2.4.6-py2.py3-none-any.whl # debugging/docker_env/share/python-wheels/requests-2.22.0-py2.py3-none-any.whl # debugging/docker_env/share/python-wheels/retrying-1.3.3-py2.py3-none-any.whl # debugging/docker_env/share/python-wheels/setuptools-44.0.0-py2.py3-none-any.whl # deb

Updated the segy.py file to import specific functions from click, rather than the entire module. The command decorator's function signatures and calls are also updated. This is to improve specificity and reduce unnecessary overhead. Additionally, modified the way command line arguments are passed in test_main.py as per the refactored changes in the main function.

The import statement for 'MDIOReader' in the copy.py file has been moved to a more appropriate position. This change aims to maximize importing efficiency by having the import statement closer to where the imported module is being used.

The MDIO info command is refactored to enhance code readability and maintenance. The new structure involves separate functions for 'cast_stats', 'parse_grid' and 'pretty_print' to each perform distinct tasks. This improves the clear segregation of tasks and ease of future modifications.

The documentation for the mdio commands has been updated to reflect changes in the command syntax. Parameters for input and output files are now required positional arguments, rather than options, enhancing the clarity and readability of the commands.

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New CLI Options #364

New CLI Options #364

Commits on Mar 7, 2024